Factsheet for TraesCS6D01G162000.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G200500.1	Wheat	extracellular, golgi	96.35	96.35
TraesCS6A01G172900.1	Wheat	extracellular, golgi	96.07	95.53
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	93.26	90.71
Zm00001d015636_P001	Maize	extracellular	77.25	76.18
Os02t0189200-01	Rice	extracellular	76.97	72.68
EES04670	Sorghum	extracellular	76.12	71.88
GSMUA_Achr4P09470_001	Banana	extracellular	52.81	54.02
TraesCS5D01G169100.1	Wheat	extracellular, golgi	51.69	51.4
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	48.88	50.58
Bra004735.1-P	Field mustard	extracellular	47.19	49.85
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	49.72	49.72
CDX93056	Canola	extracellular	49.16	49.72
Bra013200.1-P	Field mustard	extracellular	49.16	49.72
KRH14826	Soybean	endoplasmic reticulum, extracellular	48.31	49.71
Solyc07g049440.2.1	Tomato	extracellular	49.16	49.44
CDY15057	Canola	extracellular	48.88	49.43
PGSC0003DMT400001828	Potato	extracellular	48.88	49.29
TraesCS5D01G169000.1	Wheat	extracellular	48.88	49.15
AT2G04570.1	Thale cress	extracellular	48.31	49.14
KRH73314	Soybean	endoplasmic reticulum, extracellular	48.03	48.86
Solyc07g049430.2.1	Tomato	extracellular	48.31	48.73
AT4G26790.1	Thale cress	extracellular, golgi	48.03	48.72
Bra026402.1-P	Field mustard	extracellular	47.75	48.43
CDX89302	Canola	extracellular	47.75	48.43
PGSC0003DMT400038810	Potato	extracellular	48.03	48.31
CDY53653	Canola	extracellular, plasma membrane	47.47	48.29
CDY55498	Canola	extracellular, plasma membrane	47.47	48.29
CDY29250	Canola	extracellular	47.47	48.15
KRH46013	Soybean	extracellular	47.19	48.0
AT2G42990.1	Thale cress	extracellular	46.91	47.71
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	48.31	47.65
PGSC0003DMT400038808	Potato	golgi, plasma membrane	47.47	47.47
KRG98969	Soybean	extracellular	46.91	47.18
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.03	47.11
Solyc05g043330.2.1	Tomato	plasma membrane	47.19	47.06
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	47.47	46.43
KRH17906	Soybean	endoplasmic reticulum, extracellular	45.22	46.13
KRH14825	Soybean	nucleus	46.35	46.09
TraesCS3D01G002900.1	Wheat	plastid	46.07	45.81
KRH73315	Soybean	nucleus	45.51	45.25
Solyc05g043320.1.1	Tomato	cytosol	28.65	44.74
TraesCS3D01G345100.1	Wheat	extracellular	37.92	36.59
TraesCS1D01G138700.1	Wheat	endoplasmic reticulum, vacuole	37.08	35.39
TraesCS1D01G297500.1	Wheat	endoplasmic reticulum, vacuole	36.24	35.05
TraesCS2D01G278500.1	Wheat	plasma membrane, vacuole	34.55	35.04
TraesCS6D01G093000.1	Wheat	extracellular, plasma membrane	35.39	34.43
TraesCS2D01G476600.1	Wheat	mitochondrion	34.55	32.89
TraesCS7D01G346700.1	Wheat	extracellular	32.58	32.68
TraesCS7D01G347000.1	Wheat	extracellular	31.74	32.29
TraesCS1D01G322600.1	Wheat	mitochondrion, plastid	35.39	31.98
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	35.67	31.75
TraesCS6D01G002800.1	Wheat	mitochondrion	35.39	30.81
TraesCS7D01G004200.1	Wheat	mitochondrion	19.1	30.22
TraesCS5D01G566800.1	Wheat	endoplasmic reticulum, golgi	30.62	29.38
TraesCS5D01G566700.1	Wheat	mitochondrion	32.87	29.03
TraesCS7D01G346900.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	19.38	28.75
VIT_12s0059g01590.t01	Wine grape	extracellular	49.44	26.75
TraesCS6D01G030700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.27	22.8

Protein Annotations

EnsemblPlants:TraesCS6D01G162000.3	EnsemblPlantsGene:TraesCS6D01G162000	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF470	PFAM:PF00657	SEG:seg	SUPFAM:SSF52266	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chr6D:-:140189266..140190404

Molecular Weight (calculated)

38275.5 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.019

Length

356 amino acids

Sequence
(BLAST)

001: MLYTNMSMRR YAPIIVLQLC ILSGEPAAAK VPALLVLGDS TVDTGNNNYI STVVRSDFAP YGRDLRLGNG QPTGRFSNGR LTVDFISEAF GLPPLVPPYL
101: DPSANMSSLA SGACFASAGA GYDNATSDLM SVLTIWKELD YFKEYAAKLR SFQGEDKARE TLTEALYLVS MGTNDFLENY YAVPHGNAAK YPTASAYGGY
201: VLSVAESFVR ALHALGARKI DLNGMPPMGC LPMERALGGA CTEEYNAVAE DYNAGLRAVI DRLNGELGGA RIVYGDVYGP VSDALAHPTS YGLENVEAGC
301: CGATGRFEMG YLCNARNPLT CADAGKFAFW DAIHPTERLH RALADAKMNT TLHVFL

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.