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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015636_P001 Maize extracellular 87.27 91.14
TraesCS6B01G200500.1 Wheat extracellular, golgi 72.15 76.4
TraesCS6D01G162000.3 Wheat extracellular, vacuole 71.88 76.12
TraesCS6A01G172900.1 Wheat extracellular, golgi 71.88 75.7
Os02t0189200-01 Rice extracellular 73.74 73.74
HORVU6Hr1G035230.1 Barley extracellular, golgi, mitochondrion 71.09 73.22
GSMUA_Achr4P09470_001 Banana extracellular 50.4 54.6
VIT_19s0090g01160.t01 Wine grape extracellular, golgi 48.54 53.2
AT4G26790.1 Thale cress extracellular, golgi 47.48 51.0
Bra026402.1-P Field mustard extracellular 46.95 50.43
CDY29250 Canola extracellular 46.95 50.43
KRH14826 Soybean endoplasmic reticulum, extracellular 46.15 50.29
Solyc07g049440.2.1 Tomato extracellular 47.21 50.28
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 47.48 50.28
CDX89302 Canola extracellular 46.68 50.14
EES16382 Sorghum extracellular, golgi 48.54 50.14
KRH46013 Soybean extracellular 46.15 49.71
PGSC0003DMT400001828 Potato extracellular 46.42 49.58
KRH73314 Soybean endoplasmic reticulum, extracellular 45.89 49.43
OQU76903 Sorghum plastid 47.48 49.31
Bra004735.1-P Field mustard extracellular 44.03 49.26
KRG98969 Soybean extracellular 45.89 48.87
Solyc07g049430.2.1 Tomato extracellular 45.62 48.73
CDX93056 Canola extracellular 45.36 48.58
Bra013200.1-P Field mustard extracellular 45.36 48.58
CDY53653 Canola extracellular, plasma membrane 45.09 48.57
CDY15057 Canola extracellular 45.09 48.3
PGSC0003DMT400038808 Potato golgi, plasma membrane 45.36 48.03
PGSC0003DMT400038810 Potato extracellular 45.09 48.02
CDY55498 Canola extracellular, plasma membrane 44.56 48.0
KRH17906 Soybean endoplasmic reticulum, extracellular 44.3 47.85
EER90082 Sorghum golgi 46.68 47.83
AT2G04570.1 Thale cress extracellular 44.3 47.71
Solyc05g043330.2.1 Tomato plasma membrane 45.09 47.62
AT2G42990.1 Thale cress extracellular 44.03 47.43
EER96404 Sorghum extracellular, vacuole 45.36 47.11
KRH14825 Soybean nucleus 44.3 46.65
EER94394 Sorghum extracellular 43.77 46.22
KRH73315 Soybean nucleus 43.77 46.09
OQU84537 Sorghum endoplasmic reticulum, extracellular 42.71 45.22
Solyc05g043320.1.1 Tomato cytosol 26.26 43.42
KXG26546 Sorghum mitochondrion, plastid 46.42 38.98
EER99270 Sorghum extracellular, plasma membrane 36.34 38.06
EES03823 Sorghum plasma membrane 32.89 35.53
EER90469 Sorghum extracellular, vacuole 32.1 32.01
OQU78161 Sorghum extracellular 31.83 30.93
KXG38464 Sorghum cytosol 33.42 29.58
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 29.71 29.4
EER97970 Sorghum plastid 29.18 28.65
EER87686 Sorghum extracellular 33.16 28.15
KXG34395 Sorghum plastid 28.91 27.81
VIT_12s0059g01590.t01 Wine grape extracellular 48.28 27.66
OQU84135 Sorghum plasma membrane 33.69 24.33
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 33.16 16.62
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8079438UniProt:C5XX19EnsemblPlants:EES04670ProteinID:EES04670
ProteinID:EES04670.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787GO:GO:0016788
InterPro:IPR036514PFAM:PF00657PANTHER:PTHR22835PANTHER:PTHR22835:SF470InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3004G072400SignalP:SignalP-noTMUniParc:UPI0001A856DDRefSeq:XP_002451694.1SEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:5839818..5841690
Molecular Weight (calculated)
39609.5 Da
IEP (calculated)
4.686
GRAVY (calculated)
-0.061
Length
377 amino acids
Sequence
(BLAST)
001: MSALRHSLPI ILLQLYMLSG VPPATAKVTA LIVFGDSTVD TGNNNYISTL VKSDFAPYGR DLRTPGSGGG GGTSSAQPTG RFSNGRLAVD FISEAFGLPP
101: LVPAYLDPNA NMSSLATGAC FASAGAGYDN ATSDLFSVLP LWKELDYFKE YAAKLRSFHG DEKAKETLSE ALYIVSMGTN DFLENYYGVR SGDAAERAGS
201: ASGYAGYLLG VAESFARALH ALGARKLDLN GLPPMGCLPL ERHAATGACT EEYNAVARDF NAGLRDLVAR LDADDATGGG GGDDGGLGGG ARVVYGDVYG
301: PVADVLADPA AYGFDDVAAG CCGTTGRIEM GYMCNEASPL TCKDAGKYAF WDAIHPTEHL HRFLADRKMN TSLYVFQ
Best Arabidopsis Sequence Match ( AT4G26790.2 )
(BLAST)
001: MQRNRVLAFL LLAAQLLVKI PETCAKFPAL IVFGDSTVDS GNNNQISTVL KSNFQPYGRD YFDGKATGRF SNGRIAPDFI SEGLGLKNAV PAYLDPAYNI
101: ADFATGVCFA SAGTGLDNAT SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK LRKYSVNEYQ YFLIGIAADF
201: VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG
301: YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q
Arabidopsis Description
GDSL esterase/lipase At4g26790 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY93]
SUBAcon: [extracellular,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.