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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022615_P001 Maize mitochondrion, plasma membrane 92.22 80.98
Os09t0540400-02 Rice extracellular, plasma membrane 76.39 75.14
Solyc04g081760.2.1 Tomato extracellular 37.22 50.57
VIT_18s0001g14760.t01 Wine grape extracellular 38.89 50.18
Solyc04g081770.2.1 Tomato cytosol 47.5 50.15
PGSC0003DMT400025568 Potato extracellular 48.61 50.0
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 49.72 49.18
KRH17463 Soybean endoplasmic reticulum, golgi 49.17 48.76
KRH05980 Soybean endoplasmic reticulum, golgi 48.89 48.48
PGSC0003DMT400025569 Potato extracellular 47.5 48.44
VIT_18s0001g14810.t01 Wine grape cytosol 46.39 48.27
KRH51682 Soybean extracellular, golgi 48.61 48.08
Bra015802.1-P Field mustard extracellular 48.33 48.07
CDX87651 Canola extracellular 48.33 48.07
KRH61019 Soybean extracellular, plasma membrane 47.5 47.9
EER90469 Sorghum extracellular, vacuole 50.28 47.88
Bra003736.1-P Field mustard extracellular, plasma membrane 47.78 47.51
CDX73211 Canola extracellular 47.78 47.51
CDX85929 Canola endoplasmic reticulum, plasma membrane 47.78 47.51
CDX87653 Canola cytosol 40.28 47.39
KRH05977 Soybean nucleus 48.89 47.31
Solyc06g048670.2.1 Tomato extracellular 46.39 47.31
KRH17461 Soybean nucleus 48.33 47.28
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 47.78 47.25
Bra015804.1-P Field mustard cytosol 40.0 47.06
VIT_18s0001g14780.t01 Wine grape plasma membrane 43.89 47.02
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 47.5 46.98
CDX68113 Canola endoplasmic reticulum, plasma membrane 47.22 46.96
Solyc12g089350.1.1 Tomato extracellular, golgi 45.0 46.96
CDY42062 Canola cytosol 37.22 46.53
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 46.39 46.52
KRH51681 Soybean extracellular, plasma membrane 46.11 46.5
KRH55990 Soybean extracellular, plasma membrane, vacuole 46.67 46.03
Bra003737.1-P Field mustard cytosol, plastid 41.11 45.96
PGSC0003DMT400075642 Potato extracellular 45.83 45.83
CDY48852 Canola extracellular 41.11 45.4
Bra015803.1-P Field mustard cytosol 43.61 45.38
PGSC0003DMT400070969 Potato extracellular 26.94 45.33
CDY65553 Canola extracellular 41.39 45.15
CDY32339 Canola extracellular, plasma membrane 43.89 45.01
AT3G43570.1 Thale cress extracellular 40.0 45.0
CDY09420 Canola extracellular 40.0 45.0
CDY64565 Canola extracellular 40.0 45.0
KRH17462 Soybean extracellular, plasma membrane, plastid 45.83 44.96
KRH69753 Soybean extracellular, plasma membrane, vacuole 45.56 44.93
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 43.61 44.86
CDY36116 Canola extracellular, plasma membrane 39.72 44.83
CDY51993 Canola plasma membrane 39.72 44.83
KRH08025 Soybean extracellular, vacuole 45.56 44.81
AT1G58725.1 Thale cress extracellular 43.33 44.7
AT1G59030.1 Thale cress extracellular, plasma membrane 43.33 44.7
AT1G59406.1 Thale cress extracellular 43.33 44.7
CDY41727 Canola extracellular 40.28 44.48
AT1G58525.1 Thale cress extracellular 42.22 44.44
Bra035295.1-P Field mustard mitochondrion 35.56 44.44
Bra027858.1-P Field mustard extracellular 43.06 44.41
Bra027859.1-P Field mustard extracellular 43.06 44.41
CDY20086 Canola extracellular, plasma membrane 43.06 44.41
CDX85928 Canola plasma membrane 46.11 44.38
CDY70534 Canola plasma membrane 46.11 44.38
KRH17460 Soybean nucleus 44.44 44.2
CDY53577 Canola extracellular 40.0 44.17
KRH05978 Soybean plastid 46.11 44.03
Bra026636.1-P Field mustard extracellular 42.5 43.84
CDX87652 Canola golgi, plasma membrane 44.17 43.8
KRH28831 Soybean plasma membrane 44.44 43.72
Bra010987.1-P Field mustard plasma membrane 42.22 43.68
AT5G42170.1 Thale cress extracellular 44.72 43.63
AT3G14820.1 Thale cress extracellular, plasma membrane 42.5 43.59
CDY41728 Canola extracellular 39.44 43.56
AT1G75880.1 Thale cress golgi, plasma membrane 45.28 43.47
AT3G43550.1 Thale cress extracellular 34.72 43.4
KRH55993 Soybean extracellular 43.61 43.37
CDY53562 Canola extracellular 29.72 43.15
KRH05976 Soybean nucleus 44.44 43.01
CDX73210 Canola golgi, mitochondrion, plasma membrane 43.89 42.82
KRH55991 Soybean extracellular 43.06 42.82
CDY53576 Canola extracellular 39.72 42.69
EER94394 Sorghum extracellular 42.22 42.58
Bra027951.1-P Field mustard extracellular 41.11 42.41
KRH51683 Soybean plasma membrane 33.61 42.31
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 41.94 42.18
Bra027950.1-P Field mustard extracellular 40.83 42.0
KXG38464 Sorghum cytosol 49.44 41.78
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 44.17 41.73
KRH69760 Soybean extracellular 41.67 41.44
EER97970 Sorghum plastid 44.17 41.41
Solyc04g081780.2.1 Tomato extracellular 39.44 41.4
CDY02386 Canola golgi 45.0 41.33
KXG34395 Sorghum plastid 44.72 41.07
EER96404 Sorghum extracellular, vacuole 41.39 41.05
EER90082 Sorghum golgi 41.94 41.03
CDY71031 Canola cytosol 11.39 41.0
AT1G20120.1 Thale cress plasma membrane 45.28 40.55
OQU76903 Sorghum plastid 40.83 40.5
AT1G75890.3 Thale cress plastid 44.17 40.25
CDY69331 Canola cytosol 28.61 39.92
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 45.56 39.14
CDY57591 Canola endoplasmic reticulum, plasma membrane 45.56 39.14
OQU84537 Sorghum endoplasmic reticulum, extracellular 38.61 39.04
CDY44206 Canola plasma membrane 41.11 38.74
EES03823 Sorghum plasma membrane 37.5 38.68
Bra016475.1-P Field mustard plastid 40.56 38.52
KRH08023 Soybean extracellular 30.83 38.01
AT1G20132.1 Thale cress extracellular, vacuole 40.28 37.86
EES04670 Sorghum extracellular 38.06 36.34
EES16382 Sorghum extracellular, golgi 36.39 35.89
CDY54336 Canola extracellular, golgi, plasma membrane 28.06 33.01
OQU84135 Sorghum plasma membrane 47.22 32.57
OQU78161 Sorghum extracellular 34.44 31.96
KXG26546 Sorghum mitochondrion, plastid 38.89 31.18
CDY12974 Canola golgi, mitochondrion 44.44 29.57
VIT_18s0001g14770.t01 Wine grape plastid 47.5 27.23
CDY71376 Canola plastid 36.94 27.14
EER87686 Sorghum extracellular 33.06 26.8
AT1G20130.1 Thale cress mitochondrion 37.22 25.09
CDY44205 Canola plasma membrane 35.0 22.83
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 39.72 20.31
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 40.28 19.28
Bra012212.1-P Field mustard plastid 36.67 16.69
CDY29371 Canola plasma membrane 38.06 15.75
Bra025794.1-P Field mustard plasma membrane 37.78 15.28
CDY67439 Canola plasma membrane 38.06 15.27
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8074826UniProt:C5X6W4ncoils:CoilEnsemblPlants:EER99270
ProteinID:EER99270ProteinID:EER99270.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788InterPro:IPR036514
InterPro:Lipase_GDSL_ASPFAM:PF00657ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF330InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3002G280500SUPFAM:SSF52266unigene:Sbi.2488SignalP:SignalP-noTMUniParc:UPI0001A83D8D
RefSeq:XP_002462749.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:66183242..66185331
Molecular Weight (calculated)
39166.9 Da
IEP (calculated)
4.385
GRAVY (calculated)
0.070
Length
360 amino acids
Sequence
(BLAST)
001: MELGGTAMSL LLLLVLVLTV SPWQAAGAAG GGRPRVPAIL VFGDSIVDTG NNNAVLTLTK SNFRPYGKDL NGGVPTGRFS NGRIPTDFVA SRLGLKDLVP
101: AYLGTDLTDD DLCTGVSFAS GGTGYDPLTS TLVAVLPMQE ELNMFAEYKE KLAGVVGDAA AAGIVADSLF LVCAGTDDIA NNYYLAPVRP LQYDISAYVD
201: FLVEQACDFM RQLYQQGARR IAILGMPPVG CVPLQRTLAG GLARDCDPAR NHAAQLYNSR LKEEIARLQE ELQCQKIGYV DIYDILQDMI TNPCKYGFEV
301: STRGCCGTGE FEVSLLCNQV TATTCPDDRK YVFWDSFHPT ERAYEIIVDY LFPRYVENLL
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.