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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014308_P001 Maize endoplasmic reticulum 67.55 77.79
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 30.72 63.11
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.12 62.57
TraesCS6B01G133500.1 Wheat extracellular 30.05 62.26
Os10t0140300-01 Rice plasma membrane 28.72 61.89
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 31.38 60.67
TraesCS2B01G297300.1 Wheat plasma membrane 27.79 59.54
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 27.79 59.54
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 28.99 57.67
GSMUA_Achr4P25720_001 Banana vacuole 21.94 45.58
VIT_18s0001g14760.t01 Wine grape extracellular 16.09 43.37
VIT_18s0001g14810.t01 Wine grape cytosol 19.41 42.2
CDY42062 Canola cytosol 16.09 42.01
KRH51682 Soybean extracellular, golgi 20.21 41.76
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 19.68 41.23
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 19.95 41.21
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 19.95 41.21
CDY65553 Canola extracellular 17.95 40.91
CDY48852 Canola extracellular 17.69 40.8
CDY51993 Canola plasma membrane 17.29 40.75
Bra027858.1-P Field mustard extracellular 18.88 40.69
CDY64565 Canola extracellular 17.29 40.62
KRH05980 Soybean endoplasmic reticulum, golgi 19.55 40.5
CDY36116 Canola extracellular, plasma membrane 17.15 40.44
AT3G43570.1 Thale cress extracellular 17.15 40.31
CDY09420 Canola extracellular 17.15 40.31
EER99270 Sorghum extracellular, plasma membrane 19.28 40.28
KRH17463 Soybean endoplasmic reticulum, golgi 19.41 40.22
Bra027859.1-P Field mustard extracellular 18.62 40.11
AT1G58525.1 Thale cress extracellular 18.22 40.06
Bra003736.1-P Field mustard extracellular, plasma membrane 19.28 40.06
CDX85929 Canola endoplasmic reticulum, plasma membrane 19.28 40.06
CDX87653 Canola cytosol 16.22 39.87
CDX68113 Canola endoplasmic reticulum, plasma membrane 19.15 39.78
Bra010987.1-P Field mustard plasma membrane 18.35 39.66
Solyc04g081760.2.1 Tomato extracellular 13.96 39.62
Solyc04g081770.2.1 Tomato cytosol 17.95 39.59
CDY53577 Canola extracellular 17.15 39.57
Bra015804.1-P Field mustard cytosol 16.09 39.54
AT1G58725.1 Thale cress extracellular 18.35 39.54
AT1G59030.1 Thale cress extracellular, plasma membrane 18.35 39.54
AT1G59406.1 Thale cress extracellular 18.35 39.54
Bra026636.1-P Field mustard extracellular 18.35 39.54
Bra015802.1-P Field mustard extracellular 19.02 39.5
CDX73211 Canola extracellular 19.02 39.5
CDX87651 Canola extracellular 19.02 39.5
PGSC0003DMT400025569 Potato extracellular 18.35 39.09
VIT_18s0001g14780.t01 Wine grape plasma membrane 17.42 38.99
CDY41727 Canola extracellular 16.89 38.96
AT3G43550.1 Thale cress extracellular 14.89 38.89
PGSC0003DMT400025568 Potato extracellular 18.09 38.86
KRH17462 Soybean extracellular, plasma membrane, plastid 18.88 38.69
CDY20086 Canola extracellular, plasma membrane 17.95 38.68
CDY41728 Canola extracellular 16.76 38.65
KRH17461 Soybean nucleus 18.88 38.59
KRH69760 Soybean extracellular 18.48 38.4
KRH61019 Soybean extracellular, plasma membrane 18.22 38.38
PGSC0003DMT400070969 Potato extracellular 10.9 38.32
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 18.48 38.19
KRH55993 Soybean extracellular 18.35 38.12
AT1G20132.1 Thale cress extracellular, vacuole 19.41 38.12
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 17.69 38.0
KRH28831 Soybean plasma membrane 18.48 37.98
CDY44206 Canola plasma membrane 19.28 37.96
CDY32339 Canola extracellular, plasma membrane 17.69 37.89
Bra015803.1-P Field mustard cytosol 17.42 37.86
Bra027951.1-P Field mustard extracellular 17.55 37.82
AT3G14820.1 Thale cress extracellular, plasma membrane 17.55 37.61
KRH69753 Soybean extracellular, plasma membrane, vacuole 18.22 37.53
CDY53562 Canola extracellular 12.37 37.5
PGSC0003DMT400075642 Potato extracellular 17.95 37.5
Bra027950.1-P Field mustard extracellular 17.42 37.43
Solyc12g089350.1.1 Tomato extracellular, golgi 17.15 37.39
CDY53576 Canola extracellular 16.62 37.31
KRH17460 Soybean nucleus 17.95 37.29
KRH51681 Soybean extracellular, plasma membrane 17.69 37.25
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 20.74 37.23
CDY57591 Canola endoplasmic reticulum, plasma membrane 20.74 37.23
AT5G42170.1 Thale cress extracellular 18.22 37.13
Solyc06g048670.2.1 Tomato extracellular 17.42 37.11
KRH05977 Soybean nucleus 18.35 37.1
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 18.75 37.01
KRH55991 Soybean extracellular 17.69 36.74
CDY02386 Canola golgi 19.15 36.73
CDX87652 Canola golgi, plasma membrane 17.69 36.64
KRH05978 Soybean plastid 18.35 36.6
KRH55990 Soybean extracellular, plasma membrane, vacuole 17.69 36.44
KRH08025 Soybean extracellular, vacuole 17.69 36.34
Bra003737.1-P Field mustard cytosol, plastid 15.56 36.34
AT1G75880.1 Thale cress golgi, plasma membrane 18.09 36.27
CDX85928 Canola plasma membrane 17.95 36.1
CDY70534 Canola plasma membrane 17.95 36.1
AT1G20120.1 Thale cress plasma membrane 19.28 36.07
CDX73210 Canola golgi, mitochondrion, plasma membrane 17.69 36.04
KRH05976 Soybean nucleus 17.82 36.02
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 17.02 35.75
EER90469 Sorghum extracellular, vacuole 17.95 35.71
Solyc04g081780.2.1 Tomato extracellular 16.22 35.57
Bra035295.1-P Field mustard mitochondrion 13.56 35.42
EER97970 Sorghum plastid 18.09 35.42
KRH08023 Soybean extracellular 13.7 35.27
CDY71376 Canola plastid 22.74 34.9
OQU76903 Sorghum plastid 16.76 34.71
KXG34395 Sorghum plastid 18.09 34.69
AT1G75890.3 Thale cress plastid 18.09 34.43
EER94394 Sorghum extracellular 16.22 34.17
KRH51683 Soybean plasma membrane 12.9 33.92
AT1G20130.1 Thale cress mitochondrion 23.94 33.71
EER96404 Sorghum extracellular, vacuole 16.22 33.61
EES04670 Sorghum extracellular 16.62 33.16
CDY71031 Canola cytosol 4.39 33.0
Bra016475.1-P Field mustard plastid 16.36 32.45
KXG38464 Sorghum cytosol 18.35 32.39
EES03823 Sorghum plasma membrane 14.89 32.09
CDY44205 Canola plasma membrane 23.4 31.88
EES16382 Sorghum extracellular, golgi 15.43 31.78
CDY69331 Canola cytosol 10.77 31.4
OQU78161 Sorghum extracellular 15.69 30.41
OQU84537 Sorghum endoplasmic reticulum, extracellular 14.36 30.34
EER90082 Sorghum golgi 14.49 29.62
CDY54336 Canola extracellular, golgi, plasma membrane 11.84 29.09
EER87686 Sorghum extracellular 17.15 29.05
KXG26546 Sorghum mitochondrion, plastid 16.22 27.17
CDY12974 Canola golgi, mitochondrion 18.88 26.25
OQU84135 Sorghum plasma membrane 18.09 26.05
Bra012212.1-P Field mustard plastid 24.6 23.39
VIT_18s0001g14770.t01 Wine grape plastid 19.15 22.93
Bra025794.1-P Field mustard plasma membrane 25.13 21.24
CDY29371 Canola plasma membrane 24.34 21.03
CDY67439 Canola plasma membrane 23.4 19.62
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 16.22 17.33
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1UniProt:A0A1B6QLC4InterPro:GDSLGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788
InterPro:IPR036514EnsemblPlants:KXG38704ProteinID:KXG38704ProteinID:KXG38704.1InterPro:Lipase_GDSL_ASPFAM:PF00657
ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF217InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeEnsemblPlantsGene:SORBI_3001G269200
SUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI00081AC35ESEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:51588166..51591024
Molecular Weight (calculated)
80710.2 Da
IEP (calculated)
11.537
GRAVY (calculated)
-0.372
Length
752 amino acids
Sequence
(BLAST)
001: MACTTLSLLD HLVITVLLVL ARDIITAGVV IAPPPTRLRA PSPTPRPLHF GPPARTPRLP PPLLGTPPLT PLPRPWLGAP SPAHVPPRLG APSRTPILPS
101: PKVGAPPPIP PYRRKRAPPP APRVKGPIPS PVIPPPRKGT PPSNPIPAPR LGVPLPTPPL PRPRSPAFPS PRNGAPRSSP PLPTPRLGAP LPSLLPLAPA
201: PILPPHRKGT PPPAPHFKAP ILPPRRKGPP PAPHFRAPVP PPHRKGTPPP APHFKAPILP PGRKRTPPPA PHFKAPVAPP RRKGTPPPTP HFKAPVLPPR
301: RKRTPPPAPH VKAPIPSTVI PPWKDIPPST PIPAPRLGVP LPSPVRQPPR TPIVSPPRKR NPPSSPPPRL GVPLPSPVRQ PPRTPIVPPP RKRNPPSSPP
401: PRLGAPLPSP LFPPPHTPVL PPPPQYAADP PPPPPPMGGP KVPALIAFGD SIVDTGNNNY LMTVVKANFP PYGKEYPGHK ATGRFSDGKI TVDFLASAFG
501: LKETLPPYLN KNLTLEDLKT GVSFASAGSG YNNATCRTSS TMTIERQLQL FSEYKAKVGS IPERALFVVC SGSNDIVEHF TLADSMTSPE YAEMMARRAI
601: GLVEALIGQG ARQIALTGAP PVGCVPSQRR IAGGVRTQCA TDRNQLALLF NRKVSLEVAK LSGKYRGVNI FYVDLYSIVA DVVQRYQDLG FKDGKDACCG
701: YIGLAVGPLC NVGSRTCPDP SKYVFWDSYH PTERAYKIMI DDFLRRYTRY IH
Best Arabidopsis Sequence Match ( AT1G20120.1 )
(BLAST)
001: MLQDRVSGSL SSSKISRCVL FLSLFCFFLL TMHASANRLQ RVPNPGPSPA PEPKPCPSPG PNPAPATTKR THNTTFPAIF AFGDSILDTG NNDYILTLIK
101: ANFLPYGMNF PDKVPTGRFC NGKIPSDFIA DYIGVKPVVP AYLRPGLTQE DLLTGVSFAS GGSGYDPLTP IVVSAIPMSK QLTYFQEYIE KVKGFVGKEK
201: AEHIISKGLA IVVAGSDDLA NTYYGEHLEE FLYDIDTYTS FMASSAASFA MQLYESGAKK IGFIGVSPIG CIPIQRTTRG GLKRKCADEL NFAAQLFNSK
301: LSTSLNELAK TMKNTTLVYI DIYSSFNDMI QNPKKYGFDE IDRGCCGTGL LELGPLCNKY TSLLCKNVSS FMFWDSYHPT ERAYKILSQK FVENDMGPFY
401: DN
Arabidopsis Description
GDSL esterase/lipase At1g20120 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.