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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012476_P001 Maize plasma membrane 88.54 87.78
Os01t0827700-00 Rice plasma membrane 76.5 76.29
TraesCS3B01G380200.1 Wheat plasma membrane 71.63 71.23
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 72.78 67.2
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 71.63 62.5
TraesCS3A01G348300.1 Wheat mitochondrion 72.21 60.29
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 53.3 51.52
KRH72763 Soybean extracellular 47.56 45.6
Bra031550.1-P Field mustard cytosol, nucleus, peroxisome 42.69 45.57
VIT_06s0004g07450.t01 Wine grape extracellular 47.28 45.45
AT1G58430.1 Thale cress vacuole 45.85 44.44
Solyc09g030370.2.1 Tomato extracellular 44.7 44.19
PGSC0003DMT400086168 Potato extracellular 40.11 44.16
CDY06666 Canola endoplasmic reticulum, extracellular 44.13 43.02
Bra015542.1-P Field mustard endoplasmic reticulum, extracellular 43.84 42.74
AT2G30220.1 Thale cress extracellular 43.84 42.74
CDY10238 Canola extracellular 44.13 42.66
CDY10239 Canola endoplasmic reticulum, extracellular 43.55 42.46
Bra015541.1-P Field mustard extracellular 43.84 42.38
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 43.55 42.34
CDY09942 Canola extracellular, plasma membrane 42.98 42.25
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 43.55 42.11
Bra021626.1-P Field mustard endoplasmic reticulum, extracellular 43.27 42.06
Solyc12g010560.1.1 Tomato extracellular 39.26 42.02
AT2G31540.1 Thale cress endoplasmic reticulum, extracellular 43.27 41.94
AT1G06990.1 Thale cress extracellular, plasma membrane, vacuole 43.27 41.94
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 37.54 41.85
AT2G24560.1 Thale cress extracellular, vacuole 43.27 41.6
KRH72761 Soybean extracellular 42.41 41.57
CDY59061 Canola plasma membrane 42.98 41.55
AT2G30310.1 Thale cress vacuole 42.69 41.5
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 42.69 41.39
Bra022848.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 37.82 40.0
CDX84777 Canola extracellular, plasma membrane 32.95 39.52
CDY23934 Canola plastid 36.68 39.14
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 38.68 39.02
EER99270 Sorghum extracellular, plasma membrane 38.68 37.5
EER96404 Sorghum extracellular, vacuole 37.25 35.81
Bra021725.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 43.84 35.5
OQU76903 Sorghum plastid 36.68 35.26
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 38.11 34.91
CDY10810 Canola endoplasmic reticulum, vacuole 43.27 34.71
Bra018234.1-P Field mustard endoplasmic reticulum, vacuole 43.27 34.71
EES16382 Sorghum extracellular, golgi 36.1 34.52
KXG34395 Sorghum plastid 38.68 34.44
EER97970 Sorghum plastid 37.82 34.38
OQU78161 Sorghum extracellular 38.11 34.28
EER94394 Sorghum extracellular 34.96 34.17
OQU84537 Sorghum endoplasmic reticulum, extracellular 34.1 33.43
EER90469 Sorghum extracellular, vacuole 36.1 33.33
EES04670 Sorghum extracellular 35.53 32.89
EER90082 Sorghum golgi 33.81 32.07
KXG38464 Sorghum cytosol 37.54 30.75
KXG26546 Sorghum mitochondrion, plastid 38.11 29.62
EER87686 Sorghum extracellular 35.53 27.93
OQU84135 Sorghum plasma membrane 36.1 24.14
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 38.68 17.13
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 32.09 14.89
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:8057734UniProt:C5XNX3EnsemblPlants:EES03823ProteinID:EES03823
ProteinID:EES03823.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0016298GO:GO:0016787GO:GO:0016788InterPro:IPR036514InterPro:Lipase_GDSL_AS
PFAM:PF00657ScanProsite:PS01098PANTHER:PTHR22835PANTHER:PTHR22835:SF152InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
EnsemblPlantsGene:SORBI_3003G341900SUPFAM:SSF52266SignalP:SignalP-noTMUniParc:UPI0001A85869RefSeq:XP_002458703.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:-:66433943..66435860
Molecular Weight (calculated)
39041.9 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.132
Length
349 amino acids
Sequence
(BLAST)
001: MAQAHPVLLL LLFLSSTAVS SSKRIQPKFS AIFYFGDSVL DTGNNNHLPT VAVANHVPYG RDFPGKKPTG RFSNGRLIPD LLNEKLQLKE FSPPFLDTRL
101: SSNDMVTGVN FASAGSGLDD QTSQLSNTLP MSKQVGLFKD YLLRLRDIVG DKEASRIIAS SLIFISSGTN DFSHYYRSSK KRKMDIGDYQ DIVLQMVQVH
201: VKELYDLGGR QFCLAGLPPF GCTPIQITLS RDPDRACVDE QNWDAQVYNS KFQKLLTTLQ GSLHGSRIVY LDAYRALMEI LEYPAKHGFT ETTRGCCGTG
301: LREVALFCNA LTPICKNVSS YVFYDAVHPT ERVYMLVNDY IVKYVIPQF
Best Arabidopsis Sequence Match ( AT1G58430.1 )
(BLAST)
001: MWTSKTISFT LFITTTLLGS CNASAKAKTQ PLFPAILIFG DSTVDTGNNN YPSQTIFRAK HVPYGIDLPN HSPNGRFSNG KIFSDIIATK LNIKQFVPPF
101: LQPNLTDQEI VTGVCFASAG AGYDDQTSLT TQAIRVSEQP NMFKSYIARL KSIVGDKKAM KIINNALVVV SAGPNDFILN YYEVPSWRRM YPSISDYQDF
201: VLSRLNNFVK ELYSLGCRKI LVGGLPPMGC LPIQMTAQFR NVLRFCLEQE NRDSVLYNQK LQKLLPQTQA SLTGSKILYS DVYDPMMEML QNPSKYGFKE
301: TTRGCCGTGF LETSFMCNAY SSMCQNRSEF LFFDSIHPSE ATYNYIGNVL DTKIRGWLKA
Arabidopsis Description
RXF26GDSL esterase/lipase At1g58430 [Source:UniProtKB/Swiss-Prot;Acc:Q9C648]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.