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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031550.1-P Field mustard cytosol, nucleus, peroxisome 90.14 97.86
CDY59061 Canola plasma membrane 97.18 95.57
AT1G06990.1 Thale cress extracellular, plasma membrane, vacuole 83.38 82.22
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 44.79 50.8
CDY23934 Canola plastid 46.48 50.46
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 50.42 49.72
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 49.01 48.47
CDX84777 Canola extracellular, plasma membrane 39.44 48.11
Solyc09g030370.2.1 Tomato extracellular 47.32 47.59
VIT_06s0004g07450.t01 Wine grape extracellular 48.45 47.38
KRH72763 Soybean extracellular 47.32 46.15
PGSC0003DMT400086168 Potato extracellular 41.13 46.06
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 44.79 45.95
CDY10238 Canola extracellular 46.48 45.71
CDY06666 Canola endoplasmic reticulum, extracellular 45.92 45.53
CDY10239 Canola endoplasmic reticulum, extracellular 45.92 45.53
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 46.2 45.43
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 45.63 44.88
CDY70930 Canola endoplasmic reticulum, vacuole 44.23 43.73
CDY07069 Canola plasma membrane 44.23 43.73
EES03823 Sorghum plasma membrane 42.25 42.98
KRH72761 Soybean extracellular 42.82 42.7
Zm00001d012476_P001 Maize plasma membrane 41.97 42.33
Solyc12g010560.1.1 Tomato extracellular 38.59 42.02
Os01t0827700-00 Rice plasma membrane 41.41 42.0
TraesCS3B01G380200.1 Wheat plasma membrane 41.13 41.6
CDY10810 Canola endoplasmic reticulum, vacuole 50.7 41.38
CDY42062 Canola cytosol 33.52 41.32
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.97 39.42
CDY48852 Canola extracellular 36.06 39.26
CDY55498 Canola extracellular, plasma membrane 37.75 38.29
CDY53653 Canola extracellular, plasma membrane 37.75 38.29
CDY65553 Canola extracellular 35.49 38.18
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 40.56 38.1
CDY09420 Canola extracellular 34.08 37.81
CDY64565 Canola extracellular 34.08 37.81
CDY41727 Canola extracellular 34.65 37.73
CDY53577 Canola extracellular 34.65 37.73
CDY51993 Canola plasma membrane 33.8 37.62
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 41.97 37.25
CDY41728 Canola extracellular 34.08 37.12
CDY36116 Canola extracellular, plasma membrane 33.24 36.99
CDX87653 Canola cytosol 31.55 36.6
CDY53576 Canola extracellular 34.37 36.42
CDX87652 Canola golgi, plasma membrane 36.9 36.09
TraesCS3A01G348300.1 Wheat mitochondrion 42.25 35.89
CDX89302 Canola extracellular 35.21 35.61
CDY29250 Canola extracellular 35.21 35.61
CDY44206 Canola plasma membrane 38.31 35.6
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 33.8 35.5
CDY71031 Canola cytosol 9.86 35.0
CDX73210 Canola golgi, mitochondrion, plasma membrane 36.34 34.96
CDX87651 Canola extracellular 35.49 34.81
CDX93056 Canola extracellular 34.37 34.66
CDX68113 Canola endoplasmic reticulum, plasma membrane 35.21 34.53
CDX73211 Canola extracellular 35.21 34.53
CDY69331 Canola cytosol 25.07 34.5
CDX85929 Canola endoplasmic reticulum, plasma membrane 34.93 34.25
CDY15057 Canola extracellular 33.8 34.09
CDY70534 Canola plasma membrane 35.77 33.96
CDY20086 Canola extracellular, plasma membrane 33.24 33.81
CDY32339 Canola extracellular, plasma membrane 33.24 33.62
CDX87749 Canola extracellular 33.8 33.61
CDY50487 Canola extracellular 33.8 33.61
CDX85928 Canola plasma membrane 35.21 33.42
CDY53562 Canola extracellular 23.1 33.06
CDY57591 Canola endoplasmic reticulum, plasma membrane 38.31 32.46
CDY02386 Canola golgi 34.65 31.38
CDY54336 Canola extracellular, golgi, plasma membrane 23.66 27.45
CDY71376 Canola plastid 31.83 23.06
CDY12974 Canola golgi, mitochondrion 33.8 22.18
CDY44205 Canola plasma membrane 32.11 20.65
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 40.56 18.27
CDY29371 Canola plasma membrane 34.37 14.02
CDY67439 Canola plasma membrane 32.39 12.82
Protein Annotations
EnsemblPlants:CDY09942EnsemblPlantsGene:GSBRNA2T00031712001Gene3D:3.40.50.1110GO:A0A078FA71GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF152PFAM:PF00657ProteinID:CDY09942ProteinID:CDY09942.1SUPFAM:SSF52266
UniParc:UPI0004EE344FUniProt:A0A078FA71MapMan:35.1:::
Description
BnaC08g45090DBnaC08g45090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA71]
Coordinates
chrLK032000:-:183838..185896
Molecular Weight (calculated)
39333.0 Da
IEP (calculated)
4.610
GRAVY (calculated)
0.003
Length
355 amino acids
Sequence
(BLAST)
001: MLIHEIIFMI TTTIQILTCY ANAINNASMF SAILVFGDST IDTGNNNYIN TIIRANFPPY GCNFPGHHAT GRFSNGRLIP DFIASLMGIK DTVPPFLDPH
101: LSDSDILTGV CFASAGSGYD NYTDLATLSL SVDKQADMFR SYMARLSRIV GDEKAAEIVS EALVIVSSGT NDFDINLYDT PSPRIKLGVE GYQDFILSGV
201: HNFVQELYDI GCRKIMVLGL PPIGCLPVQM TFARQKQNER RCIDKQNSDS QEYNQKLKKS LTDIQSNLTG SVIFYADIYG TILDMATNPQ SYGIKETTRG
301: CCGTGELELS YLCNPLTRTC PDANDYLFWD DIHPTQLAYL VVSLSLVDQI LHVLQ
Best Arabidopsis Sequence Match ( AT1G06990.1 )
(BLAST)
001: MLIHVIIFMI ITTMQFSTTC HAYVINVTNV NVSMFPAILV FGDSTIDTGN NNYIKTYIRA NFPPYGCNFP GHNATGRFSN GKLIPDFIAS LMGIKDTVPP
101: FLDPHLSDSD IITGVCFASA GSGYDNLTDR ATSTLSVDKQ ADMLRSYVER LSQIVGDEKA ASIVSEALVI VSSGTNDFNL NLYDTPSRRQ KLGVDGYQSF
201: ILSNVHNFVQ ELYDIGCRKI MVLGLPPVGC LPIQMTMAMQ KQNERRCIDK QNSDSQEFNQ KLKNSLTEMQ SNLTGSVIFY GDIYGALFDM ATNPQRYGLK
301: ETTRGCCGTG EIELAYLCNA LTRICPNPNQ YLFWDDIHPS QIAYIVISLS LVEQIFHVLS
Arabidopsis Description
GDSL esterase/lipase At1g06990 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMJ3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.