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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022003.1-P Field mustard endoplasmic reticulum, golgi, vacuole 94.67 84.43
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 93.49 83.6
AT5G45960.1 Thale cress endoplasmic reticulum, golgi, vacuole 77.51 69.87
VIT_10s0003g00600.t01 Wine grape extracellular, vacuole 50.3 46.45
KRH10964 Soybean endoplasmic reticulum, plasma membrane 48.82 45.08
KRH21336 Soybean extracellular 48.52 44.81
KRH20355 Soybean extracellular, plasma membrane 48.82 44.72
KRH50140 Soybean extracellular, golgi, plasma membrane 48.52 44.57
PGSC0003DMT400068453 Potato cytosol 44.08 43.19
Solyc10g008810.2.1 Tomato extracellular 45.56 42.9
Solyc10g008820.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 41.72 39.39
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 34.02 36.74
CDY09942 Canola extracellular, plasma membrane 35.5 33.8
CDY10238 Canola extracellular 35.8 33.52
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 35.5 33.33
CDY07069 Canola plasma membrane 35.21 33.15
CDY70930 Canola endoplasmic reticulum, vacuole 34.91 32.87
CDY59061 Canola plasma membrane 34.91 32.69
CDY10239 Canola endoplasmic reticulum, extracellular 34.62 32.68
CDY15057 Canola extracellular 34.02 32.67
CDY53562 Canola extracellular 23.96 32.66
CDY06666 Canola endoplasmic reticulum, extracellular 34.32 32.4
CDX93056 Canola extracellular 33.73 32.39
CDY53653 Canola extracellular, plasma membrane 33.43 32.29
CDX87749 Canola extracellular 34.02 32.21
CDY55498 Canola extracellular, plasma membrane 33.14 32.0
CDY50487 Canola extracellular 33.73 31.93
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 33.43 31.48
CDX87652 Canola golgi, plasma membrane 33.14 30.85
CDX73211 Canola extracellular 32.84 30.66
CDX87651 Canola extracellular 32.54 30.39
CDX73210 Canola golgi, mitochondrion, plasma membrane 33.14 30.35
CDY20086 Canola extracellular, plasma membrane 31.07 30.09
CDY32339 Canola extracellular, plasma membrane 31.07 29.91
CDX68113 Canola endoplasmic reticulum, plasma membrane 31.95 29.83
CDX85929 Canola endoplasmic reticulum, plasma membrane 31.95 29.83
CDX87653 Canola cytosol 26.92 29.74
CDY29250 Canola extracellular 30.77 29.63
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 30.18 29.48
CDX85928 Canola plasma membrane 32.54 29.41
CDY42062 Canola cytosol 24.85 29.17
CDY70534 Canola plasma membrane 32.25 29.14
CDX89302 Canola extracellular 30.18 29.06
CDY23934 Canola plastid 27.81 28.75
CDY65553 Canola extracellular 27.81 28.48
CDY48852 Canola extracellular 27.22 28.22
CDX84777 Canola extracellular, plasma membrane 24.26 28.18
CDY10810 Canola endoplasmic reticulum, vacuole 36.09 28.05
CDY51993 Canola plasma membrane 26.33 27.9
CDY36116 Canola extracellular, plasma membrane 26.33 27.9
CDY41727 Canola extracellular 26.63 27.61
CDY09420 Canola extracellular 26.04 27.5
CDY64565 Canola extracellular 25.74 27.19
CDY53577 Canola extracellular 26.04 26.99
CDY53576 Canola extracellular 26.63 26.87
CDY41728 Canola extracellular 25.74 26.69
CDY44206 Canola plasma membrane 29.88 26.44
CDY57591 Canola endoplasmic reticulum, plasma membrane 32.25 26.01
CDY69331 Canola cytosol 19.23 25.19
CDY02386 Canola golgi 28.4 24.49
CDY54336 Canola extracellular, golgi, plasma membrane 17.75 19.61
CDY71376 Canola plastid 28.4 19.59
CDY12974 Canola golgi, mitochondrion 28.7 17.93
CDY44205 Canola plasma membrane 28.99 17.75
CDY29371 Canola plasma membrane 30.18 11.72
CDY67439 Canola plasma membrane 28.99 10.93
CDY71031 Canola cytosol 2.07 7.0
Protein Annotations
EnsemblPlants:CDY50488EnsemblPlantsGene:GSBRNA2T00096873001Gene3D:3.40.50.1110GO:A0A078IN76GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF261PFAM:PF00657ProteinID:CDY50488ProteinID:CDY50488.1SEG:seg
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE669FUniProt:A0A078IN76MapMan:35.1:
Description
BnaA02g24180DBnaA02g24180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN76]
Coordinates
chrLK032916:-:72860..76038
Molecular Weight (calculated)
38409.3 Da
IEP (calculated)
8.851
GRAVY (calculated)
-0.068
Length
338 amino acids
Sequence
(BLAST)
001: MRSHHTHSSF SLSFIFLFLF FNIFSLSTPK LEPLKPSPLG SYHQRKQPVS AILVFGDSTV DPGNNNYIET AFKCNFPPYG LDFKNSIPTG RFCNGRLVTD
101: FIGSYIGVKE FVPAYLDPNL GINDLMSGVS FASAGSGFDP LTPTIGNVID IPTQLEHFRE YKRKLESKIG KQNMEKHIKE AIFCVSAGTN DFVINYFTIP
201: IRRKSFTIEA YQHFVTYNLK QFIQDLWHEG ARIITVAGLP PIGCLPIVIT VFSGEPLTNR RCIDRFSTVA INYNFYLQKE LDLMQTSLAH LGSKIFYLDV
301: YNPVYEIILD HRRFGKQAHQ PINNLDTVFG INKIINPR
Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)
001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
Arabidopsis Description
GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.