CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	94.51	91.09
AT2G30310.1	Thale cress	vacuole	85.26	82.17
AT2G30220.1	Thale cress	extracellular	83.81	81.01
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	60.12	66.45
CDY34491	Canola	endoplasmic reticulum, extracellular, vacuole	68.79	66.11
CDX84777	Canola	extracellular, plasma membrane	54.91	65.29
CDY23934	Canola	plastid	60.98	64.53
CDY10238	Canola	extracellular	64.16	61.5
CDY10239	Canola	endoplasmic reticulum, extracellular	62.43	60.34
CDY06666	Canola	endoplasmic reticulum, extracellular	61.85	59.78
CDY10810	Canola	endoplasmic reticulum, vacuole	69.36	55.17
VIT_06s0004g07450.t01	Wine grape	extracellular	50.58	48.21
Solyc09g030370.2.1	Tomato	extracellular	46.24	45.33
CDY09942	Canola	extracellular, plasma membrane	45.95	44.79
KRH72763	Soybean	extracellular	47.11	44.78
CDY59061	Canola	plasma membrane	45.95	44.04
PGSC0003DMT400086168	Potato	extracellular	39.88	43.53
Solyc04g007440.1.1	Tomato	extracellular, golgi, vacuole	44.8	42.94
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	43.35	41.55
KRH72761	Soybean	extracellular	42.2	41.01
Solyc12g010560.1.1	Tomato	extracellular	37.28	39.57
TraesCS3B01G380200.1	Wheat	plasma membrane	39.88	39.32
Os01t0827700-00	Rice	plasma membrane	39.6	39.14
CDY07069	Canola	plasma membrane	40.17	38.72
CDY70930	Canola	endoplasmic reticulum, vacuole	40.17	38.72
EES03823	Sorghum	plasma membrane	39.02	38.68
CDY69331	Canola	cytosol	28.03	37.6
Zm00001d012476_P001	Maize	plasma membrane	38.15	37.5
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.31	35.98
CDY64565	Canola	extracellular	33.24	35.94
CDX85929	Canola	endoplasmic reticulum, plasma membrane	37.28	35.64
CDY41727	Canola	extracellular	33.53	35.58
CDY41728	Canola	extracellular	33.53	35.58
CDY42062	Canola	cytosol	29.48	35.42
CDY09420	Canola	extracellular	32.66	35.31
CDY53577	Canola	extracellular	33.24	35.28
CDX68113	Canola	endoplasmic reticulum, plasma membrane	36.71	35.08
CDX73211	Canola	extracellular	36.71	35.08
CDY71031	Canola	cytosol	10.12	35.0
CDX87651	Canola	extracellular	36.42	34.81
CDY36116	Canola	extracellular, plasma membrane	32.08	34.8
CDX87653	Canola	cytosol	30.64	34.64
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	39.88	34.5
CDY48852	Canola	extracellular	32.37	34.36
CDY53576	Canola	extracellular	33.24	34.33
CDY51993	Canola	plasma membrane	31.5	34.17
CDY65553	Canola	extracellular	32.37	33.94
CDY15057	Canola	extracellular	34.39	33.81
CDX93056	Canola	extracellular	34.39	33.81
CDX87748	Canola	endoplasmic reticulum, golgi, vacuole	36.71	33.6
TraesCS3A01G348300.1	Wheat	mitochondrion	40.17	33.25
CDY55498	Canola	extracellular, plasma membrane	33.53	33.14
CDY53653	Canola	extracellular, plasma membrane	33.24	32.86
CDX89302	Canola	extracellular	33.24	32.76
CDY29250	Canola	extracellular	32.95	32.48
CDX85928	Canola	plasma membrane	34.39	31.82
CDY70534	Canola	plasma membrane	34.39	31.82
CDY44206	Canola	plasma membrane	34.68	31.41
CDY54336	Canola	extracellular, golgi, plasma membrane	27.17	30.72
CDY20086	Canola	extracellular, plasma membrane	30.92	30.66
CDX87749	Canola	extracellular	31.5	30.53
CDY32339	Canola	extracellular, plasma membrane	30.92	30.48
CDX87652	Canola	golgi, plasma membrane	31.79	30.3
CDY50488	Canola	endoplasmic reticulum, golgi, vacuole	29.48	30.18
CDY50487	Canola	extracellular	30.92	29.97
CDX73210	Canola	golgi, mitochondrion, plasma membrane	31.5	29.54
CDY02386	Canola	golgi	33.24	29.34
CDY57591	Canola	endoplasmic reticulum, plasma membrane	34.39	28.4
CDY53562	Canola	extracellular	19.94	27.82
CDY71376	Canola	plastid	32.37	22.86
CDY12974	Canola	golgi, mitochondrion	32.95	21.07
CDY44205	Canola	plasma membrane	30.35	19.02
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	40.75	17.89
CDY29371	Canola	plasma membrane	33.24	13.22
CDY67439	Canola	plasma membrane	32.66	12.6

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078IXA3	UniProt:A0A078IXA3	EnsemblPlants:CDY54004	ProteinID:CDY54004
ProteinID:CDY54004.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788
EnsemblPlantsGene:GSBRNA2T00011905001	InterPro:IPR036514	PFAM:PF00657	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF152
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EBA513

Description

BnaCnng25870DBnaCnng25870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXA3]

Coordinates

chrLK033264:+:10220..11483

Molecular Weight (calculated)

38274.1 Da

IEP (calculated)

8.080

GRAVY (calculated)

-0.103

Length

346 amino acids

Sequence
(BLAST)

001: MCTSKTIVLA LFVATLMASC NAATIATPQP PFPAILIFGD STADTGNNNY HSQAVFKAKH LPYGVDLPGH EANGSLQTSH QRVCSFLQPN ISDQDIVTGV
101: CFASAGAGYD DRTSLSSKAI PVSKQPSMFK DYIARLKGIV GDKKAMEIIN NALVVISAGS NDFIWNFYDI PTRRLEYPDI YGYQEFVLKR LDGFVRELYS
201: LGSRNIVVGG LPPMGCLPVQ MTTKMRNVMR FCVEQENTDS VLYNQKLVKK LPEIEASLPG SKFLYANVYD PVMDMIQNPS KYGFKVTKKG CCGTGYLETG
301: FMCNVISKTC PNHSDHLFWD SIHPSEAAYK YLGNFVDAQI RGWLKT

Best Arabidopsis Sequence Match ( AT2G30310.1 )
(BLAST)

001: MSTSKTIVFG LFVATLLVSC NVAANATTQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGVDLPGH EANGRYSNGK VISDVIASKL NIKELVPPFL
101: QPNISHQDIV TGVSFASAGA GYDDRSSLSS KAIPVSQQPS MFKNYIARLK GIVGDKKAME IINNALVVIS AGPNDFILNF YDIPTRRLEY PTIHGYQEFI
201: LKRLDGFVRE LYSLGCRNIV VGGLPPMGCL PIQMTAKMRN ILRFCVEQEN KDSVLYNQKL VKKLPEIQAS LPGSNFLYAN VYDPLMDMIQ NPSKYGFKET
301: KKGCCGTGYL ETTFMCNPLT KTCPNHSDHL FWDSIHPSEA AYNYIGNFVD AQIRGWIKA

Arabidopsis Description

GDSL esterase/lipase At2g30310 [Source:UniProtKB/Swiss-Prot;Acc:O22927]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.