Factsheet for PGSC0003DMT400086168

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 8
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g030370.2.1	Tomato	extracellular	93.69	84.14
VIT_06s0004g07450.t01	Wine grape	extracellular	54.26	47.38
CDY10238	Canola	extracellular	51.1	44.88
Bra015541.1-P	Field mustard	extracellular	50.79	44.6
AT2G31540.1	Thale cress	endoplasmic reticulum, extracellular	50.47	44.44
CDY10239	Canola	endoplasmic reticulum, extracellular	50.16	44.41
KRH72763	Soybean	extracellular	50.47	43.96
AT1G58430.1	Thale cress	vacuole	49.84	43.89
AT2G30310.1	Thale cress	vacuole	49.53	43.73
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	45.11	43.73
AT2G30220.1	Thale cress	extracellular	49.21	43.58
CDY34491	Canola	endoplasmic reticulum, extracellular, vacuole	49.21	43.33
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	48.9	43.3
CDY06666	Canola	endoplasmic reticulum, extracellular	48.9	43.3
AT2G24560.1	Thale cress	extracellular, vacuole	49.53	43.25
KRH72761	Soybean	extracellular	47.95	42.7
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	48.27	42.62
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	47.95	42.34
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	41.01	41.53
Os01t0827700-00	Rice	plasma membrane	45.43	41.14
CDY09942	Canola	extracellular, plasma membrane	46.06	41.13
AT1G06990.1	Thale cress	extracellular, plasma membrane, vacuole	46.37	40.83
CDY59061	Canola	plasma membrane	46.37	40.72
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	45.74	40.17
EES03823	Sorghum	plasma membrane	44.16	40.11
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.64	40.0
CDY54004	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.53	39.88
CDY23934	Canola	plastid	41.01	39.76
TraesCS3B01G380200.1	Wheat	plasma membrane	43.85	39.6
Zm00001d012476_P001	Maize	plasma membrane	43.85	39.49
PGSC0003DMT400068453	Potato	cytosol	42.59	39.13
CDX84777	Canola	extracellular, plasma membrane	34.38	37.46
PGSC0003DMT400025569	Potato	extracellular	41.32	37.11
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	49.84	36.32
CDY10810	Canola	endoplasmic reticulum, vacuole	49.84	36.32
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.22	36.24
PGSC0003DMT400025568	Potato	extracellular	39.75	36.0
PGSC0003DMT400058744	Potato	plasma membrane	40.69	35.44
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.95	35.27
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	43.53	34.5
PGSC0003DMT400075642	Potato	extracellular	38.17	33.61
TraesCS3A01G348300.1	Wheat	mitochondrion	43.53	33.01
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	36.91	32.87
PGSC0003DMT400070969	Potato	extracellular	22.08	32.71
PGSC0003DMT400038808	Potato	golgi, plasma membrane	34.38	30.62
PGSC0003DMT400038810	Potato	extracellular	34.07	30.51
PGSC0003DMT400001828	Potato	extracellular	33.12	29.75
PGSC0003DMT400027838	Potato	extracellular	33.44	29.61
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	45.11	18.15
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	34.7	15.62

Protein Annotations

EnsemblPlants:PGSC0003DMT400086168	EnsemblPlantsGene:PGSC0003DMG400035739	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF152	PGSC:PGSC0003DMG400035739	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
UniParc:UPI0002968681	UniProt:M1DB51	MapMan:35.1	:	:	:

Description

GDSL-motif lipase/hydrolase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400035739]

Coordinates

chr9:+:39839743..39841090

Molecular Weight (calculated)

35372.1 Da

IEP (calculated)

9.121

GRAVY (calculated)

-0.103

Length

317 amino acids

Sequence
(BLAST)

001: MGIAITCFAF ILLVQHCIII NAKSVPKFPA ILIFGDSTVD TGNNNYISTI FQGNHRPYGE NFPGRIPTGR FSDGKLVPDF LASMLGIKEY IPPFLQPNLS
101: NHDLLTGVNF ASAGSGYDDL TTTATKVIPM SDQIKYFEQY IQKLQLIIGE EKAQKLISGA LVVDLYNLGV RNMLVAGLPP VGCLPIQITA KSPFLRKCIK
201: EENFDAQSYN VKLATLLKQI QDALLGSNIL YSDSYHPFMH MINHPKKYGF LKTRRGCCGS GTYEAGPFCN KHRPVCKNAS EYLFWDSIHP GESAYQHLSN
301: MAMKKLRHHK LSHSKIH

Best Arabidopsis Sequence Match ( AT2G30310.1 )
(BLAST)

001: MSTSKTIVFG LFVATLLVSC NVAANATTQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGVDLPGH EANGRYSNGK VISDVIASKL NIKELVPPFL
101: QPNISHQDIV TGVSFASAGA GYDDRSSLSS KAIPVSQQPS MFKNYIARLK GIVGDKKAME IINNALVVIS AGPNDFILNF YDIPTRRLEY PTIHGYQEFI
201: LKRLDGFVRE LYSLGCRNIV VGGLPPMGCL PIQMTAKMRN ILRFCVEQEN KDSVLYNQKL VKKLPEIQAS LPGSNFLYAN VYDPLMDMIQ NPSKYGFKET
301: KKGCCGTGYL ETTFMCNPLT KTCPNHSDHL FWDSIHPSEA AYNYIGNFVD AQIRGWIKA

Arabidopsis Description

GDSL esterase/lipase At2g30310 [Source:UniProtKB/Swiss-Prot;Acc:O22927]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.