CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	70.83	81.47
CDY10810	Canola	endoplasmic reticulum, vacuole	97.22	80.46
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	96.94	80.23
AT2G31540.1	Thale cress	endoplasmic reticulum, extracellular	78.61	78.61
CDY23934	Canola	plastid	69.17	76.15
AT2G24560.1	Thale cress	extracellular, vacuole	76.39	75.76
CDX84777	Canola	extracellular, plasma membrane	61.11	75.6
AT1G58430.1	Thale cress	vacuole	73.89	73.89
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	69.72	69.92
CDY54004	Canola	endoplasmic reticulum, plasma membrane, vacuole	66.11	68.79
CDY10238	Canola	extracellular	64.17	63.99
CDY10239	Canola	endoplasmic reticulum, extracellular	61.94	62.29
CDY06666	Canola	endoplasmic reticulum, extracellular	61.94	62.29
VIT_06s0004g07450.t01	Wine grape	extracellular	52.5	52.07
CDY09942	Canola	extracellular, plasma membrane	49.72	50.42
CDY59061	Canola	plasma membrane	49.44	49.31
PGSC0003DMT400086168	Potato	extracellular	43.33	49.21
Solyc09g030370.2.1	Tomato	extracellular	47.78	48.73
KRH72763	Soybean	extracellular	47.78	47.25
Solyc04g007440.1.1	Tomato	extracellular, golgi, vacuole	46.94	46.81
Solyc12g010560.1.1	Tomato	extracellular	41.67	46.01
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	44.72	44.6
Os01t0827700-00	Rice	plasma membrane	41.67	42.86
TraesCS3B01G380200.1	Wheat	plasma membrane	41.67	42.73
KRH72761	Soybean	extracellular	42.22	42.7
EES03823	Sorghum	plasma membrane	41.39	42.69
Zm00001d012476_P001	Maize	plasma membrane	40.28	41.19
CDY07069	Canola	plasma membrane	40.0	40.11
CDY70930	Canola	endoplasmic reticulum, vacuole	39.72	39.83
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.39	39.42
CDX87748	Canola	endoplasmic reticulum, golgi, vacuole	40.83	38.89
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	42.22	38.0
CDX87653	Canola	cytosol	31.39	36.93
TraesCS3A01G348300.1	Wheat	mitochondrion	42.78	36.84
CDY36116	Canola	extracellular, plasma membrane	31.67	35.74
CDY64565	Canola	extracellular	31.67	35.62
CDY09420	Canola	extracellular	31.67	35.62
CDY50488	Canola	endoplasmic reticulum, golgi, vacuole	33.33	35.5
CDY51993	Canola	plasma membrane	31.39	35.42
CDY41727	Canola	extracellular	31.94	35.28
CDY69331	Canola	cytosol	25.28	35.27
CDY42062	Canola	cytosol	28.06	35.07
CDY53577	Canola	extracellular	31.67	34.97
CDX87651	Canola	extracellular	35.0	34.81
CDX73211	Canola	extracellular	35.0	34.81
CDY41728	Canola	extracellular	31.39	34.66
CDY55498	Canola	extracellular, plasma membrane	33.61	34.57
CDX85929	Canola	endoplasmic reticulum, plasma membrane	34.72	34.53
CDY53653	Canola	extracellular, plasma membrane	33.33	34.29
CDX68113	Canola	endoplasmic reticulum, plasma membrane	34.44	34.25
CDY48852	Canola	extracellular	30.83	34.05
CDY53576	Canola	extracellular	31.67	34.03
CDY32339	Canola	extracellular, plasma membrane	33.06	33.9
CDY20086	Canola	extracellular, plasma membrane	32.78	33.81
CDY70534	Canola	plasma membrane	35.0	33.69
CDX85928	Canola	plasma membrane	35.0	33.69
CDY65553	Canola	extracellular	30.83	33.64
CDX87652	Canola	golgi, plasma membrane	32.78	32.51
CDY71031	Canola	cytosol	8.89	32.0
CDY44206	Canola	plasma membrane	33.89	31.94
CDX87749	Canola	extracellular	31.39	31.65
CDY15057	Canola	extracellular	30.83	31.53
CDX93056	Canola	extracellular	30.83	31.53
CDX73210	Canola	golgi, mitochondrion, plasma membrane	32.22	31.44
CDY50487	Canola	extracellular	31.11	31.37
CDY29250	Canola	extracellular	30.28	31.05
CDY57591	Canola	endoplasmic reticulum, plasma membrane	35.83	30.79
CDX89302	Canola	extracellular	30.0	30.77
CDY53562	Canola	extracellular	20.83	30.24
CDY02386	Canola	golgi	32.5	29.85
CDY54336	Canola	extracellular, golgi, plasma membrane	23.89	28.1
CDY71376	Canola	plastid	30.83	22.65
CDY12974	Canola	golgi, mitochondrion	32.5	21.63
CDY44205	Canola	plasma membrane	29.17	19.02
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	41.11	18.78
CDY29371	Canola	plasma membrane	30.83	12.76
CDY67439	Canola	plasma membrane	31.67	12.71

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	GO:A0A078H9S7	UniProt:A0A078H9S7	EnsemblPlants:CDY34491	ProteinID:CDY34491
ProteinID:CDY34491.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788
EnsemblPlantsGene:GSBRNA2T00056856001	InterPro:IPR036514	PFAM:PF00657	PFscan:PS51257	PANTHER:PTHR22835	PANTHER:PTHR22835:SF152
InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EF0388

Description

BnaC04g13080DBnaC04g13080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9S7]

Coordinates

chrLK032335:-:74332..75585

Molecular Weight (calculated)

40098.3 Da

IEP (calculated)

7.725

GRAVY (calculated)

0.026

Length

360 amino acids

Sequence
(BLAST)

001: MSTSKTIAFI TLFLATTLFA SCNAAANATT KPLFPAILIF GDSTVDTGNN NYPLNIFRAT HFPYGIDLPD HKANGRFSNG KLIPDILAGK FNIKQFVPPF
101: LQPNLSDQEI VTGVCFASAG SGYDDLTSLS TQAIPVSEQP KMFRNYIARL KSIVGDKKAM EIINNALVVI SAGTNDMVLN FYTIPTRRLE FPFISGYHEF
201: ILKRLYGFIG ELYSLGARNI AIAGLPPIGC LPIQMTAKFR NIFRFCLEQE NKDSVVYNQK LQKLLPQIQS SHTGSKIFYA DIYNPIFDMM QNPSKYGFTE
301: TKRGCCGTGF LETSFMCNVF SPSCPNHAEF LFFDSIHPSE ATYNYIGDLL DTQVREWIAA

Best Arabidopsis Sequence Match ( AT2G31540.1 )
(BLAST)

001: MSTSKAITLT LFIATTLLAP CNAAANATTK PLFPAILIFG DSTVDTGNNN YPLPTIFRAE HFPYGMDLPD GKANGRFSNG KLISDIIATK LNIKEFIPPF
101: LQPNLSDQDI LTGVCFASAG AGYDDLTSLS TQAIRVSEQP NMFKSYIARL KGIVGDKKAM EIINNAFVVV SAGPNDFILN YYEIPSRRLE YPFISGYQDF
201: ILKRLENFVR ELYSLGVRNV LVGGLPPMGC LPIHMTAKFR NIFRFCLEHH NKDSVLYNEK LQNLLPQIEA SLPGSKFLYA DVYNPMMEMI QNPSKYGFKE
301: TKRGCCGTGF LETSFMCNVF SPVCQNRSEF LFFDSIHPSE ATYNVIGNLL DPLIRGKFQA

Arabidopsis Description

GDSL esterase/lipase At2g31540 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIQ3]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.