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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84777 Canola extracellular, plasma membrane 81.35 91.41
Bra022848.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 84.71 83.94
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 76.15 69.17
AT2G31540.1 Thale cress endoplasmic reticulum, extracellular 75.54 68.61
AT2G24560.1 Thale cress extracellular, vacuole 75.54 68.04
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 64.22 67.09
AT1G58430.1 Thale cress vacuole 72.17 65.56
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 69.11 62.95
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 64.53 60.98
CDY10238 Canola extracellular 63.0 57.06
CDY10810 Canola endoplasmic reticulum, vacuole 75.54 56.78
CDY10239 Canola endoplasmic reticulum, extracellular 61.47 56.15
CDY06666 Canola endoplasmic reticulum, extracellular 61.16 55.87
CDY09942 Canola extracellular, plasma membrane 50.46 46.48
CDY59061 Canola plasma membrane 49.85 45.15
VIT_06s0004g07450.t01 Wine grape extracellular 48.93 44.08
KRH72763 Soybean extracellular 48.62 43.68
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 47.09 42.66
Solyc09g030370.2.1 Tomato extracellular 44.95 41.64
PGSC0003DMT400086168 Potato extracellular 39.76 41.01
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 43.73 39.61
KRH72761 Soybean extracellular 43.12 39.61
Solyc12g010560.1.1 Tomato extracellular 38.84 38.96
Os01t0827700-00 Rice plasma membrane 40.98 38.29
TraesCS3B01G380200.1 Wheat plasma membrane 40.37 37.61
EES03823 Sorghum plasma membrane 39.14 36.68
CDY69331 Canola cytosol 28.44 36.05
CDY70930 Canola endoplasmic reticulum, vacuole 39.45 35.93
Zm00001d012476_P001 Maize plasma membrane 38.53 35.8
CDY07069 Canola plasma membrane 39.14 35.65
CDX87653 Canola cytosol 33.33 35.62
CDY42062 Canola cytosol 30.89 35.07
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.06 34.66
CDY71031 Canola cytosol 10.4 34.0
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 41.28 33.75
TraesCS3A01G348300.1 Wheat mitochondrion 41.59 32.54
CDY53577 Canola extracellular 32.42 32.52
CDY64565 Canola extracellular 31.8 32.5
CDY41727 Canola extracellular 32.11 32.21
CDY41728 Canola extracellular 32.11 32.21
CDX85929 Canola endoplasmic reticulum, plasma membrane 35.47 32.04
CDY55498 Canola extracellular, plasma membrane 34.25 32.0
CDY09420 Canola extracellular 31.19 31.88
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 36.7 31.75
CDY53653 Canola extracellular, plasma membrane 33.95 31.71
CDY48852 Canola extracellular 31.5 31.6
CDY65553 Canola extracellular 31.8 31.52
CDX73211 Canola extracellular 34.86 31.49
CDX68113 Canola endoplasmic reticulum, plasma membrane 34.86 31.49
CDX87651 Canola extracellular 34.56 31.22
CDY53576 Canola extracellular 31.8 31.04
CDY36116 Canola extracellular, plasma membrane 29.97 30.72
CDY51993 Canola plasma membrane 29.66 30.41
CDY15057 Canola extracellular 32.42 30.11
CDX93056 Canola extracellular 32.42 30.11
CDY70534 Canola plasma membrane 33.95 29.68
CDY29250 Canola extracellular 31.8 29.63
CDX89302 Canola extracellular 31.8 29.63
CDY20086 Canola extracellular, plasma membrane 31.5 29.51
CDX85928 Canola plasma membrane 33.64 29.41
CDY32339 Canola extracellular, plasma membrane 31.5 29.34
CDY44206 Canola plasma membrane 33.64 28.8
CDY54336 Canola extracellular, golgi, plasma membrane 26.91 28.76
CDX87652 Canola golgi, plasma membrane 31.8 28.65
CDY02386 Canola golgi 33.95 28.32
CDX73210 Canola golgi, mitochondrion, plasma membrane 31.8 28.18
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 28.75 27.81
CDX87749 Canola extracellular 30.28 27.73
CDY50487 Canola extracellular 30.28 27.73
CDY57591 Canola endoplasmic reticulum, plasma membrane 34.56 26.97
CDY53562 Canola extracellular 19.57 25.81
CDY71376 Canola plastid 30.89 20.61
CDY12974 Canola golgi, mitochondrion 33.03 19.96
CDY44205 Canola plasma membrane 29.36 17.39
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 41.59 17.26
CDY29371 Canola plasma membrane 30.89 11.61
CDY67439 Canola plasma membrane 31.19 11.37
Protein Annotations
EnsemblPlants:CDY23934EnsemblPlantsGene:GSBRNA2T00024437001Gene3D:3.40.50.1110GO:A0A078GF20GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF152PFAM:PF00657ProteinID:CDY23934ProteinID:CDY23934.1SUPFAM:SSF52266
UniParc:UPI0004EE473CUniProt:A0A078GF20MapMan:35.1:::
Description
BnaC03g17570DBnaC03g17570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF20]
Coordinates
chrLK032152:+:34548..35836
Molecular Weight (calculated)
36981.6 Da
IEP (calculated)
7.765
GRAVY (calculated)
-0.060
Length
327 amino acids
Sequence
(BLAST)
001: MSTSKTITYT LFIAATHYSR NNNYPLNTIF RATHFPYGID LPNHEASGRF SNGKLIPDIL AAKYNIKDLV PPFLQPNLSD QDILTGVCFA SASSGYDDRT
101: SLSTQSIPVL EQPNMFRSYI ARLTSIVGDK KAMEIIHNAL VIISAGSNDF ILNFYTVPAR RLEYPYISGY QDFILKRLEI LVQELYSLGC RNIMVVGIPV
201: QMTAKFRNIF RFCIEQENID SVLYNEKLPK ALPKIEASLS GSKILYANVY DPMFDMMQNP SKYGFKETKR GCCGTGHLEM TLLCNAVSPL CWNRSEFLFF
301: DSIHPSEATY NYIGNLLDTQ IRGWIAA
Best Arabidopsis Sequence Match ( AT2G24560.1 )
(BLAST)
001: MSTSKTITFT LFIAALLSSC DAATNATSQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGIDLPNH KASGRFTNGK IFSDIIATKL NIKQFVPPFL
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS
Arabidopsis Description
GDSL esterase/lipase At2g24560 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.