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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022003.1-P Field mustard endoplasmic reticulum, golgi, vacuole 98.94 98.68
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 83.6 93.49
AT5G45960.1 Thale cress endoplasmic reticulum, golgi, vacuole 82.01 82.67
VIT_10s0003g00600.t01 Wine grape extracellular, vacuole 55.29 57.1
KRH20355 Soybean extracellular, plasma membrane 52.65 53.93
KRH10964 Soybean endoplasmic reticulum, plasma membrane 52.12 53.83
KRH50140 Soybean extracellular, golgi, plasma membrane 52.38 53.8
KRH21336 Soybean extracellular 51.85 53.55
PGSC0003DMT400068453 Potato cytosol 47.88 52.46
Solyc10g008810.2.1 Tomato extracellular 49.21 51.81
Solyc10g008820.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 45.24 47.77
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 38.89 40.83
CDY09942 Canola extracellular, plasma membrane 38.1 40.56
CDY10238 Canola extracellular 38.62 40.44
CDY07069 Canola plasma membrane 38.36 40.39
CDY10239 Canola endoplasmic reticulum, extracellular 37.83 39.94
CDY70930 Canola endoplasmic reticulum, vacuole 37.83 39.83
CDY06666 Canola endoplasmic reticulum, extracellular 37.57 39.66
CDY59061 Canola plasma membrane 37.57 39.34
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 36.51 38.44
CDX73211 Canola extracellular 36.77 38.4
CDX87651 Canola extracellular 36.77 38.4
CDY15057 Canola extracellular 35.71 38.35
CDY42062 Canola cytosol 29.1 38.19
CDX93056 Canola extracellular 35.45 38.07
CDX87653 Canola cytosol 30.69 37.91
CDX87652 Canola golgi, plasma membrane 36.24 37.74
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 31.22 37.7
CDX73210 Canola golgi, mitochondrion, plasma membrane 36.77 37.67
CDY55498 Canola extracellular, plasma membrane 34.66 37.43
CDY53653 Canola extracellular, plasma membrane 34.66 37.43
CDY32339 Canola extracellular, plasma membrane 34.66 37.32
CDX85929 Canola endoplasmic reticulum, plasma membrane 35.71 37.29
CDX87749 Canola extracellular 35.19 37.25
CDX84777 Canola extracellular, plasma membrane 28.57 37.11
CDX68113 Canola endoplasmic reticulum, plasma membrane 35.45 37.02
CDY50487 Canola extracellular 34.92 36.97
CDY20086 Canola extracellular, plasma membrane 34.13 36.96
CDY29250 Canola extracellular 34.13 36.75
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 33.6 36.71
CDY23934 Canola plastid 31.75 36.7
CDY65553 Canola extracellular 31.75 36.36
CDY48852 Canola extracellular 31.22 36.2
CDX89302 Canola extracellular 33.6 36.18
CDY69331 Canola cytosol 24.34 35.66
CDY09420 Canola extracellular 30.16 35.62
CDY41727 Canola extracellular 30.69 35.58
CDX85928 Canola plasma membrane 35.19 35.56
CDY51993 Canola plasma membrane 29.89 35.42
CDY36116 Canola extracellular, plasma membrane 29.89 35.42
CDY64565 Canola extracellular 29.89 35.31
CDY70534 Canola plasma membrane 34.92 35.29
CDY53577 Canola extracellular 30.42 35.28
CDY41728 Canola extracellular 30.16 34.97
CDY53576 Canola extracellular 30.69 34.63
CDY10810 Canola endoplasmic reticulum, vacuole 39.68 34.48
CDY44206 Canola plasma membrane 33.86 33.51
CDY53562 Canola extracellular 21.96 33.47
CDY71031 Canola cytosol 8.47 32.0
CDY57591 Canola endoplasmic reticulum, plasma membrane 35.45 31.98
CDY02386 Canola golgi 32.54 31.38
CDY54336 Canola extracellular, golgi, plasma membrane 23.28 28.76
CDY71376 Canola plastid 31.22 24.08
CDY12974 Canola golgi, mitochondrion 32.01 22.37
CDY44205 Canola plasma membrane 29.63 20.29
CDY29371 Canola plasma membrane 33.6 14.6
CDY67439 Canola plasma membrane 31.48 13.27
Protein Annotations
EnsemblPlants:CDX87748EnsemblPlantsGene:GSBRNA2T00146816001Gene3D:3.40.50.1110GO:A0A078DKH8GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF261PFAM:PF00657ProteinID:CDX87748ProteinID:CDX87748.1SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF52266TMHMM:TMhelixUniParc:UPI0004EC5259MapMan:35.1:
Description
BnaC02g32010D
Coordinates
chrLK031851:+:920137..923894
Molecular Weight (calculated)
42860.7 Da
IEP (calculated)
8.300
GRAVY (calculated)
0.012
Length
378 amino acids
Sequence
(BLAST)
001: MRSHHTHSSF SLSFFLFLFF NIFSLSTPKL EPLKPSPLGS YHQRKQPVSA ILVFGDSTVD PGNNNYIPTA FKCNFPPYGL DFKNSIPTGR FCNGRLVTDF
101: IGSYIGVKEF VPAYLDPNLG INDLMSGVSF ASAGSGFDPL TPTIGNVIDI PTQLEHFREY KRKLESKIGK QNMEKQIKEA IFCVSAGTND FVINYFTIPI
201: RRKSFTIEAY QHFVTYNLKQ FIQDLWHEGA RIITVAGLPP IGCLPIVITV FSGEPLTNRR CIDRFSTVAI NYNFYLQKEL DLMQKSLAHL GSKIFYLDVY
301: NPVYEIILDH RRFGFEEVSR GCCGIGYLEA SVLCNPKSYV CPNTSAYVFF DSIHPSEKTY FILFKALRPI IDSFLSSF
Best Arabidopsis Sequence Match ( AT5G45960.1 )
(BLAST)
001: MRSHHRHFSS YVSFILFLFL FFISFSSSTS KLEPAKSEPK RKHSVSAILV FGDSTVDPGN NNYIDTVFKC NFPPYGLDFR NKTPTGRFCN GRLVTDFIAS
101: YIGVKENVPP YLDPNLGINE LISGVSFASA GSGYDPLTPT ITNVIDIPTQ LEYFREYKRK LEGKMGKQEM EKHIEEAMFC VSAGTNDFVI NYFTIPIRRK
201: TFTIEAYQQF VISNLKQFIQ GLWKEGARKI TVAGLPPIGC LPIVITLFSG EALTNRRCID RFSTVATNYN FLLQKQLALM QVGLAHLGSK IFYLDVYNPV
301: YEVIRDPRKF GFEEVFSGCC GSGYLEASFL CNPKSYVCPN TSAYVFFDSI HPSEKTYFSL FRSLRPIYDS ILGSF
Arabidopsis Description
GDSL esterase/lipase At5g45960 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ40]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.