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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06666 Canola endoplasmic reticulum, extracellular 95.25 95.25
CDY10238 Canola extracellular 88.55 87.81
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 64.53 64.35
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 55.31 63.26
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 60.34 62.43
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 62.29 61.94
CDX84777 Canola extracellular, plasma membrane 50.0 61.51
CDY23934 Canola plastid 56.15 61.47
VIT_06s0004g07450.t01 Wine grape extracellular 52.51 51.79
CDY10810 Canola endoplasmic reticulum, vacuole 62.57 51.49
PGSC0003DMT400086168 Potato extracellular 44.41 50.16
Solyc09g030370.2.1 Tomato extracellular 48.32 49.01
KRH72763 Soybean extracellular 49.44 48.63
CDY09942 Canola extracellular, plasma membrane 45.53 45.92
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 45.53 45.15
CDY59061 Canola plasma membrane 45.53 45.15
EES03823 Sorghum plasma membrane 42.46 43.55
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 43.85 43.49
Solyc12g010560.1.1 Tomato extracellular 39.39 43.25
Os01t0827700-00 Rice plasma membrane 41.62 42.57
KRH72761 Soybean extracellular 41.62 41.85
TraesCS3B01G380200.1 Wheat plasma membrane 40.78 41.6
Zm00001d012476_P001 Maize plasma membrane 40.5 41.19
CDY70930 Canola endoplasmic reticulum, vacuole 40.22 40.11
CDY07069 Canola plasma membrane 39.94 39.83
CDY42062 Canola cytosol 31.28 38.89
CDY09420 Canola extracellular 34.64 38.75
CDY64565 Canola extracellular 34.64 38.75
CDY41727 Canola extracellular 35.2 38.65
CDY41728 Canola extracellular 35.2 38.65
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.5 38.36
CDY36116 Canola extracellular, plasma membrane 34.08 38.24
CDY51993 Canola plasma membrane 34.08 38.24
CDY53577 Canola extracellular 34.64 38.04
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 39.94 37.83
CDY48852 Canola extracellular 34.08 37.42
CDY53576 Canola extracellular 34.92 37.31
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 41.62 37.25
CDY65553 Canola extracellular 33.8 36.67
CDY55498 Canola extracellular, plasma membrane 35.2 36.0
TraesCS3A01G348300.1 Wheat mitochondrion 41.9 35.89
CDY53653 Canola extracellular, plasma membrane 34.92 35.71
CDX73211 Canola extracellular 35.75 35.36
CDX89302 Canola extracellular 34.64 35.33
CDY29250 Canola extracellular 34.64 35.33
CDX87651 Canola extracellular 35.47 35.08
CDX85929 Canola endoplasmic reticulum, plasma membrane 35.2 34.81
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 32.68 34.62
CDY20086 Canola extracellular, plasma membrane 33.52 34.38
CDX93056 Canola extracellular 33.8 34.38
CDX68113 Canola endoplasmic reticulum, plasma membrane 34.64 34.25
CDY15057 Canola extracellular 33.24 33.81
CDY32339 Canola extracellular, plasma membrane 32.96 33.62
CDX87653 Canola cytosol 28.49 33.33
CDY71031 Canola cytosol 9.22 33.0
CDY69331 Canola cytosol 23.74 32.95
CDY44206 Canola plasma membrane 34.08 31.94
CDX87749 Canola extracellular 31.56 31.65
CDY02386 Canola golgi 34.36 31.38
CDY50487 Canola extracellular 31.28 31.37
CDY57591 Canola endoplasmic reticulum, plasma membrane 36.59 31.26
CDX87652 Canola golgi, plasma membrane 31.56 31.13
CDX73210 Canola golgi, mitochondrion, plasma membrane 31.84 30.89
CDY53562 Canola extracellular 20.95 30.24
CDY70534 Canola plasma membrane 31.56 30.21
CDX85928 Canola plasma membrane 31.56 30.21
CDY54336 Canola extracellular, golgi, plasma membrane 22.91 26.8
CDY71376 Canola plastid 31.28 22.86
CDY12974 Canola golgi, mitochondrion 33.24 22.0
CDY44205 Canola plasma membrane 31.28 20.29
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 40.22 18.27
CDY29371 Canola plasma membrane 34.08 14.02
CDY67439 Canola plasma membrane 32.12 12.82
Protein Annotations
EnsemblPlants:CDY10239EnsemblPlantsGene:GSBRNA2T00032063001Gene3D:3.40.50.1110GO:A0A078FB30GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF152PFAM:PF00657ProteinID:CDY10239ProteinID:CDY10239.1SignalP:SignalP-noTM
SUPFAM:SSF52266UniParc:UPI0004EF1401UniProt:A0A078FB30MapMan:35.1::
Description
BnaC05g04820DBnaC05g04820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB30]
Coordinates
chrLK032001:+:716108..717473
Molecular Weight (calculated)
39035.4 Da
IEP (calculated)
9.374
GRAVY (calculated)
-0.042
Length
358 amino acids
Sequence
(BLAST)
001: MATSKTIAVI LFLTTLVASS NAAKKATTRP LAPAILIFGD SSVDTGNNNY LPDANFKSNH IPYGVDLPGK AASGRFSNGK LYCDIIASKL HIKELVPPFL
101: QPNLSDTEIV TGVNFASAGS GYDDQTVLLT KAIPIAYQPT MLKSYITRLK GIVGEKKAME IINGAIVIVS AGTNDFILNY YDFPSRTQEY PKVSDYQNFV
201: LKRLEKFVKE LYNLGCRKMS VGGLSPMGCL PIQITSKLSR GISRRCIKSE NKDAVLYNRK LQKLLPAIEA SLPGSKILYA NVYDPMMDMI KHPAKYGFKE
301: TKIGCCGTGG LSDMCNSGSK LCSNHSEYMF FDSIHPSLAT YTYLAGSSYA TLSKLLDA
Best Arabidopsis Sequence Match ( AT1G58430.1 )
(BLAST)
001: MWTSKTISFT LFITTTLLGS CNASAKAKTQ PLFPAILIFG DSTVDTGNNN YPSQTIFRAK HVPYGIDLPN HSPNGRFSNG KIFSDIIATK LNIKQFVPPF
101: LQPNLTDQEI VTGVCFASAG AGYDDQTSLT TQAIRVSEQP NMFKSYIARL KSIVGDKKAM KIINNALVVV SAGPNDFILN YYEVPSWRRM YPSISDYQDF
201: VLSRLNNFVK ELYSLGCRKI LVGGLPPMGC LPIQMTAQFR NVLRFCLEQE NRDSVLYNQK LQKLLPQTQA SLTGSKILYS DVYDPMMEML QNPSKYGFKE
301: TTRGCCGTGF LETSFMCNAY SSMCQNRSEF LFFDSIHPSE ATYNYIGNVL DTKIRGWLKA
Arabidopsis Description
RXF26GDSL esterase/lipase At1g58430 [Source:UniProtKB/Swiss-Prot;Acc:Q9C648]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.