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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015542.1-P Field mustard endoplasmic reticulum, extracellular 99.44 99.44
CDY10239 Canola endoplasmic reticulum, extracellular 95.25 95.25
CDY10238 Canola extracellular 87.15 86.43
CDY29681 Canola endoplasmic reticulum, extracellular, vacuole 63.97 63.79
CDY19082 Canola endoplasmic reticulum, extracellular, vacuole 55.31 63.26
CDY34491 Canola endoplasmic reticulum, extracellular, vacuole 62.29 61.94
CDY54004 Canola endoplasmic reticulum, plasma membrane, vacuole 59.78 61.85
CDX84777 Canola extracellular, plasma membrane 50.0 61.51
CDY23934 Canola plastid 55.87 61.16
CDY10810 Canola endoplasmic reticulum, vacuole 62.57 51.49
VIT_06s0004g07450.t01 Wine grape extracellular 51.68 50.96
PGSC0003DMT400086168 Potato extracellular 43.3 48.9
Solyc09g030370.2.1 Tomato extracellular 48.04 48.73
KRH72763 Soybean extracellular 48.32 47.53
CDY09942 Canola extracellular, plasma membrane 45.53 45.92
CDY59061 Canola plasma membrane 45.53 45.15
Solyc04g007440.1.1 Tomato extracellular, golgi, vacuole 44.97 44.6
EES03823 Sorghum plasma membrane 43.02 44.13
GSMUA_Achr5P14310_001 Banana extracellular, plasma membrane, vacuole 44.13 43.77
Os01t0827700-00 Rice plasma membrane 42.46 43.43
TraesCS3B01G380200.1 Wheat plasma membrane 42.18 43.02
Solyc12g010560.1.1 Tomato extracellular 38.83 42.64
KRH72761 Soybean extracellular 41.62 41.85
Zm00001d012476_P001 Maize plasma membrane 41.06 41.76
CDY07069 Canola plasma membrane 41.06 40.95
CDY70930 Canola endoplasmic reticulum, vacuole 40.5 40.39
HORVU3Hr1G088120.3 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.62 39.42
CDY09420 Canola extracellular 34.36 38.44
CDY64565 Canola extracellular 34.36 38.44
CDY41727 Canola extracellular 34.92 38.34
CDY41728 Canola extracellular 34.92 38.34
CDY42062 Canola cytosol 30.73 38.19
TraesCS3D01G341900.1 Wheat mitochondrion, plasma membrane 42.46 38.0
CDY51993 Canola plasma membrane 33.8 37.93
CDY53577 Canola extracellular 34.36 37.73
CDY36116 Canola extracellular, plasma membrane 33.52 37.62
CDX87748 Canola endoplasmic reticulum, golgi, vacuole 39.66 37.57
CDY53576 Canola extracellular 34.64 37.01
CDY48852 Canola extracellular 33.52 36.81
TraesCS3A01G348300.1 Wheat mitochondrion 42.74 36.6
CDY65553 Canola extracellular 33.24 36.06
CDY55498 Canola extracellular, plasma membrane 34.36 35.14
CDY29250 Canola extracellular 34.36 35.04
CDX89302 Canola extracellular 34.36 35.04
CDY53653 Canola extracellular, plasma membrane 34.08 34.86
CDX73211 Canola extracellular 34.92 34.53
CDY50488 Canola endoplasmic reticulum, golgi, vacuole 32.4 34.32
CDX87651 Canola extracellular 34.64 34.25
CDY20086 Canola extracellular, plasma membrane 33.24 34.1
CDX85929 Canola endoplasmic reticulum, plasma membrane 34.36 33.98
CDX93056 Canola extracellular 33.24 33.81
CDX68113 Canola endoplasmic reticulum, plasma membrane 33.8 33.43
CDY32339 Canola extracellular, plasma membrane 32.68 33.33
CDY15057 Canola extracellular 32.68 33.24
CDX87653 Canola cytosol 28.21 33.01
CDY71031 Canola cytosol 8.94 32.0
CDY69331 Canola cytosol 22.91 31.78
CDY44206 Canola plasma membrane 33.52 31.41
CDX87652 Canola golgi, plasma membrane 31.28 30.85
CDX73210 Canola golgi, mitochondrion, plasma membrane 31.56 30.62
CDY02386 Canola golgi 33.52 30.61
CDY57591 Canola endoplasmic reticulum, plasma membrane 35.47 30.31
CDX87749 Canola extracellular 30.17 30.25
CDY70534 Canola plasma membrane 31.56 30.21
CDX85928 Canola plasma membrane 31.56 30.21
CDY50487 Canola extracellular 29.89 29.97
CDY53562 Canola extracellular 20.39 29.44
CDY54336 Canola extracellular, golgi, plasma membrane 22.35 26.14
CDY71376 Canola plastid 31.56 23.06
CDY12974 Canola golgi, mitochondrion 32.4 21.44
CDY44205 Canola plasma membrane 31.01 20.11
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 39.94 18.15
CDY29371 Canola plasma membrane 33.8 13.91
CDY67439 Canola plasma membrane 32.4 12.93
Protein Annotations
EnsemblPlants:CDY06666EnsemblPlantsGene:GSBRNA2T00122831001Gene3D:3.40.50.1110GO:A0A078EZU3GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
ncoils:CoilPANTHER:PTHR22835PANTHER:PTHR22835:SF152PFAM:PF00657ProteinID:CDY06666ProteinID:CDY06666.1
SignalP:SignalP-noTMSUPFAM:SSF52266UniParc:UPI0004EDAE26MapMan:35.1::
Description
BnaA10g04450D
Coordinates
chrLK031972:+:171541..172918
Molecular Weight (calculated)
39067.5 Da
IEP (calculated)
9.393
GRAVY (calculated)
-0.070
Length
358 amino acids
Sequence
(BLAST)
001: MATSKTLAVI LFLTTLVASS NAAKKATTRP LAPAILIFGD SSFDTGNNNY LPDANFKSNH IPYGVDLPGK AASGRFSNGK LYCDIIASKL HIKELVPPFL
101: QPNLSDTEIV TGVNFASAGS GFDDQTMLLT KAIPVAYQPT MLKSYITRLK GIVGEKKAME IINSAIVMIS AGTNDFILNY YDFPSRRQEY PKVSDYQNFV
201: LKGLEKFVKE LYNLGCRKMS VGGLPPVGCL PIQVTSKPGR GISRRCIKSE NKDAVLYNRK LQKLLPAIEA SLPGSKILYA NVYDPMMDMM KHPARYGFKE
301: TKIGCCGTGG LSDMCNSGSK LCSNHSEYMF FDSIHPSLAT YTYLAGSSYA TLSKLLDA
Best Arabidopsis Sequence Match ( AT1G58430.1 )
(BLAST)
001: MWTSKTISFT LFITTTLLGS CNASAKAKTQ PLFPAILIFG DSTVDTGNNN YPSQTIFRAK HVPYGIDLPN HSPNGRFSNG KIFSDIIATK LNIKQFVPPF
101: LQPNLTDQEI VTGVCFASAG AGYDDQTSLT TQAIRVSEQP NMFKSYIARL KSIVGDKKAM KIINNALVVV SAGPNDFILN YYEVPSWRRM YPSISDYQDF
201: VLSRLNNFVK ELYSLGCRKI LVGGLPPMGC LPIQMTAQFR NVLRFCLEQE NRDSVLYNQK LQKLLPQTQA SLTGSKILYS DVYDPMMEML QNPSKYGFKE
301: TTRGCCGTGF LETSFMCNAY SSMCQNRSEF LFFDSIHPSE ATYNYIGNVL DTKIRGWLKA
Arabidopsis Description
RXF26GDSL esterase/lipase At1g58430 [Source:UniProtKB/Swiss-Prot;Acc:Q9C648]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.