Factsheet for Solyc12g010560.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007440.1.1	Tomato	extracellular, golgi, vacuole	59.2	53.46
KRH72763	Soybean	extracellular	51.23	45.88
Bra022848.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.4	44.85
Solyc09g030370.2.1	Tomato	extracellular	48.47	44.76
CDX84777	Canola	extracellular, plasma membrane	39.88	44.67
VIT_06s0004g07450.t01	Wine grape	extracellular	49.39	44.35
AT2G31540.1	Thale cress	endoplasmic reticulum, extracellular	46.32	41.94
CDY34491	Canola	endoplasmic reticulum, extracellular, vacuole	46.01	41.67
AT2G30220.1	Thale cress	extracellular	45.71	41.62
AT1G58430.1	Thale cress	vacuole	45.71	41.39
KRH72761	Soybean	extracellular	45.09	41.29
CDY19082	Canola	endoplasmic reticulum, extracellular, vacuole	39.57	41.21
AT2G24560.1	Thale cress	extracellular, vacuole	45.4	40.77
Bra031550.1-P	Field mustard	cytosol, nucleus, peroxisome	40.8	40.67
Bra015541.1-P	Field mustard	extracellular	44.79	40.44
CDY10238	Canola	extracellular	44.79	40.44
GSMUA_Achr5P14310_001	Banana	extracellular, plasma membrane, vacuole	44.48	40.17
AT2G30310.1	Thale cress	vacuole	44.17	40.11
Os01t0827700-00	Rice	plasma membrane	42.94	40.0
CDY10239	Canola	endoplasmic reticulum, extracellular	43.25	39.39
EES03823	Sorghum	plasma membrane	42.02	39.26
Bra021626.1-P	Field mustard	endoplasmic reticulum, extracellular	42.94	39.0
CDY23934	Canola	plastid	38.96	38.84
Bra015542.1-P	Field mustard	endoplasmic reticulum, extracellular	42.64	38.83
CDY06666	Canola	endoplasmic reticulum, extracellular	42.64	38.83
CDY29681	Canola	endoplasmic reticulum, extracellular, vacuole	42.64	38.72
CDY09942	Canola	extracellular, plasma membrane	42.02	38.59
CDY59061	Canola	plasma membrane	42.02	37.95
CDY54004	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.57	37.28
Zm00001d012476_P001	Maize	plasma membrane	40.18	37.22
Bra021725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.08	37.12
TraesCS3B01G380200.1	Wheat	plasma membrane	39.88	37.04
AT1G06990.1	Thale cress	extracellular, plasma membrane, vacuole	39.88	36.11
Bra018234.1-P	Field mustard	endoplasmic reticulum, vacuole	46.93	35.17
CDY10810	Canola	endoplasmic reticulum, vacuole	46.63	34.94
HORVU3Hr1G088120.3	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.57	34.13
Solyc10g008820.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	37.42	34.08
Solyc10g008810.2.1	Tomato	extracellular	37.42	33.98
Solyc05g043320.1.1	Tomato	cytosol	23.62	33.77
Solyc12g089350.1.1	Tomato	extracellular, golgi	35.58	33.62
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	35.89	33.43
TraesCS3D01G341900.1	Wheat	mitochondrion, plasma membrane	40.49	33.0
Solyc05g043330.2.1	Tomato	plasma membrane	35.89	32.77
Solyc07g049430.2.1	Tomato	extracellular	35.28	32.58
Solyc04g081770.2.1	Tomato	cytosol	34.05	32.55
Solyc07g049440.2.1	Tomato	extracellular	35.28	32.49
Solyc06g048670.2.1	Tomato	extracellular	34.97	32.29
Solyc02g077340.1.1	Tomato	golgi, plasma membrane, vacuole	36.81	32.09
TraesCS3A01G348300.1	Wheat	mitochondrion	41.1	32.06
Solyc02g077330.2.1	Tomato	extracellular, golgi	34.97	31.67
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	34.36	31.28
Solyc04g081780.2.1	Tomato	extracellular	31.6	30.03
Solyc04g081760.2.1	Tomato	extracellular	23.93	29.43

Protein Annotations

EnsemblPlants:Solyc12g010560.1.1	EnsemblPlantsGene:Solyc12g010560.1	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	ncoils:Coil
PANTHER:PTHR22835	PANTHER:PTHR22835:SF152	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
UniParc:UPI0002769E67	UniProt:K4DCE3	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr12:-:3537223..3539299

Molecular Weight (calculated)

36925.5 Da

IEP (calculated)

6.500

GRAVY (calculated)

-0.019

Length

326 amino acids

Sequence
(BLAST)

001: MAFKTFFFFF MILCYCNIIV TSQANTNIPK FTSILVFGDS SVDTGNNNHI DTIAKGNHLP YGQDFTNHIP TGRFSNGKLV PDMLSISLGL KKMVFLLIYN
101: MKEELEYFKE YLSNIKDIVG GNSSEVERIV NGALVILSAG TNDLIFNFYN LPNRRLQFSL NGYQDFLLHK VQRFIKELYY LGCRNIIVNG LPPIGCLPMQ
201: ITAKSPFFRS CINEENSDAE IYNQKLQDLL IQLQSHLPGS KILYADTYNL ISELIHNPRL HGFKETKVGC CGTGLLEAGP FCTELSYVCS NPSRFVFFDS
301: IHPSESTYDK AAQYLIDEIL PKFGEN

Best Arabidopsis Sequence Match ( AT2G24560.1 )
(BLAST)

001: MSTSKTITFT LFIAALLSSC DAATNATSQP LFPAILIFGD STVDTGNNNY HSQTIFKAKH LPYGIDLPNH KASGRFTNGK IFSDIIATKL NIKQFVPPFL
101: QPNLSDQEIV TGVCFASAGA GYDDHTSLST QAIRVLDQQK MFKNYIARLK SIVGDKKAME IIKNALVVIS AGPNDFILNY YDIPSRRLEF PHISGYQDFV
201: LQRLDNFVRE LYSLGCRKIM VGGLPPMGCL PIQMTAKFRN ALRFCLEQEN RDSVLYNQKL QNLLPQIEAS LTGSKILYSN VYDPMMDMMQ NPSKYGFKET
301: KRGCCGTGHL ETSFMCNAFS PTCRNHSEFL FFDSIHPSEA TYNYMGNFLD TQIRVWLSLR LKS

Arabidopsis Description

GDSL esterase/lipase At2g24560 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.