Factsheet for PGSC0003DMT400038808

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g043330.2.1	Tomato	plasma membrane	97.47	97.2
PGSC0003DMT400038810	Potato	extracellular	76.69	77.12
PGSC0003DMT400001828	Potato	extracellular	72.47	73.09
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	61.8	63.95
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	60.39	60.39
Bra026402.1-P	Field mustard	extracellular	58.15	58.97
CDX89302	Canola	extracellular	58.15	58.97
CDY29250	Canola	extracellular	58.15	58.97
AT4G26790.1	Thale cress	extracellular, golgi	57.3	58.12
GSMUA_Achr7P05490_001	Banana	endoplasmic reticulum, extracellular	56.46	57.1
GSMUA_Achr2P05280_001	Banana	extracellular	50.28	56.47
GSMUA_Achr3P13030_001	Banana	endoplasmic reticulum, golgi	55.06	55.52
GSMUA_Achr4P09480_001	Banana	endoplasmic reticulum, golgi	53.65	54.57
TraesCS6A01G172800.1	Wheat	extracellular, vacuole	49.72	51.91
GSMUA_Achr4P09470_001	Banana	extracellular	50.28	51.44
TraesCS6B01G200400.1	Wheat	extracellular, plastid	49.16	50.87
TraesCSU01G210200.1	Wheat	extracellular	49.16	49.72
TraesCSU01G186900.1	Wheat	extracellular	49.16	49.72
TraesCS3A01G007800.1	Wheat	endoplasmic reticulum, extracellular	48.88	49.43
Zm00001d015637_P001	Maize	extracellular	49.72	49.3
TraesCSU01G187000.1	Wheat	extracellular	47.47	48.99
TraesCS6D01G161900.1	Wheat	endoplasmic reticulum	49.44	48.75
EER90082	Sorghum	golgi	50.28	48.64
Zm00001d036770_P001	Maize	mitochondrion	50.56	48.39
TraesCS3D01G002900.1	Wheat	plastid	48.6	48.32
OQU84537	Sorghum	endoplasmic reticulum, extracellular	48.31	48.31
Os09t0132900-02	Rice	extracellular	47.47	48.01
Os06t0636700-01	Rice	extracellular	51.4	47.91
Zm00001d015636_P001	Maize	extracellular	48.31	47.65
HORVU5Hr1G049650.2	Barley	extracellular, vacuole	48.03	47.5
HORVU0Hr1G012390.2	Barley	extracellular, vacuole	48.03	47.5
TraesCS6D01G162000.3	Wheat	extracellular, vacuole	47.47	47.47
TraesCS5A01G164200.1	Wheat	extracellular	47.47	47.34
HORVU7Hr1G092040.2	Barley	golgi	48.88	47.15
TraesCS7B01G290600.1	Wheat	golgi	48.31	46.99
TraesCS7D01G384600.1	Wheat	endoplasmic reticulum, extracellular, golgi	48.03	46.98
TraesCS5D01G169100.1	Wheat	extracellular, golgi	47.19	46.93
Zm00001d019855_P001	Maize	extracellular, golgi	46.35	46.88
HORVU6Hr1G035230.1	Barley	extracellular, golgi, mitochondrion	48.03	46.72
TraesCS7A01G388700.1	Wheat	extracellular	47.75	46.58
TraesCS5B01G161700.1	Wheat	golgi	46.91	46.52
Os09t0132200-01	Rice	extracellular	45.79	46.44
Os02t0189300-01	Rice	endoplasmic reticulum, extracellular	47.47	46.43
TraesCS6A01G172900.1	Wheat	extracellular, golgi	46.63	46.37
TraesCS6B01G200500.1	Wheat	extracellular, golgi	46.35	46.35
EES16382	Sorghum	extracellular, golgi	47.47	46.3
Zm00001d046642_P001	Maize	extracellular, golgi	50.0	45.76
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	45.22	45.61
Zm00001d014487_P001	Maize	plastid	46.63	45.6
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	45.22	45.48
TraesCS5B01G161500.1	Wheat	extracellular	45.22	45.48
EES04670	Sorghum	extracellular	48.03	45.36
Zm00001d000061_P001	Maize	extracellular, golgi	44.38	45.01
OQU76903	Sorghum	plastid	45.79	44.9
TraesCS5D01G169000.1	Wheat	extracellular	44.38	44.63
Os02t0189200-01	Rice	extracellular	47.19	44.56
EER96404	Sorghum	extracellular, vacuole	45.22	44.35
HORVU6Hr1G035210.2	Barley	cytosol, peroxisome	50.0	44.06
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	42.42	43.64
EER94394	Sorghum	extracellular	43.54	43.42
Os09t0247600-01	Rice	extracellular, golgi	42.42	42.42
TraesCS5B01G164400.1	Wheat	endoplasmic reticulum, vacuole	42.42	41.48
TraesCS5D01G171800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.13	41.32
TraesCS5A01G167400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.13	41.21
PGSC0003DMT400025569	Potato	extracellular	39.61	39.94
HORVU3Hr1G001200.2	Barley	mitochondrion	45.79	39.56
PGSC0003DMT400025568	Potato	extracellular	38.2	38.86
PGSC0003DMT400027838	Potato	extracellular	38.48	38.27
PGSC0003DMT400068453	Potato	cytosol	36.24	37.39
PGSC0003DMT400075642	Potato	extracellular	37.64	37.22
KXG26546	Sorghum	mitochondrion, plastid	46.63	36.97
PGSC0003DMT400070969	Potato	extracellular	22.19	36.92
VIT_12s0059g01590.t01	Wine grape	extracellular	66.29	35.87
PGSC0003DMT400058744	Potato	plasma membrane	36.24	35.44
PGSC0003DMT400086168	Potato	extracellular	30.62	34.38
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	32.02	16.19
PGSC0003DMT400091356	Potato	cytosol, nucleus, plasma membrane	32.87	14.85

Protein Annotations

EntrezGene:102586444	Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	UniProt:M1B7D7	PFAM:PF00657	EnsemblPlantsGene:PGSC0003DMG401014997
PGSC:PGSC0003DMG401014997	EnsemblPlants:PGSC0003DMT400038808	PANTHER:PTHR22835	PANTHER:PTHR22835:SF276	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
SUPFAM:SSF52266	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00029599F7	RefSeq:XP_006342261.1	SEG:seg

Description

Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG401014997]

Coordinates

chr5:-:32104516..32108115

Molecular Weight (calculated)

39985.6 Da

IEP (calculated)

7.075

GRAVY (calculated)

0.086

Length

356 amino acids

Sequence
(BLAST)

001: MEANYKFIPC LIIIFVQLII IPCVVGGKVP AIIVFGDSSV DAGNNNQIST VLKSNFEPYG RDFYGKMPTG RFCNGRIPPD FISEAFGLRP FVPAYLDPMF
101: SITDFAGGVC FASAGTGYDN ATSQVLSVIP LWKEIENYKE YQKKLEAYVG SKKAKYIIQE ALYLVSLGTN DFLENYYSIQ SKRASQFTIE QYQGFLIELA
201: ENFIKQIYQL GARKISFTGL PPMGCLPLER ATNIIRGHGD VCNEKYNDCA LRFNVMLNGL VDKLNRELPG MKMVFSNPYE LILQIIRNPS SFGFEVAGVA
301: CCGTGLFEMS YLCDKLNPLT CTDANKYVFW DSFHLSQKTN LIIANFLMKN VLNQFL

Best Arabidopsis Sequence Match ( AT2G04570.1 )
(BLAST)

001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL

Arabidopsis Description

GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.