CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76903	Sorghum	plastid	71.9	71.9
HORVU0Hr1G012230.2	Barley	extracellular, vacuole	62.26	64.02
TraesCS5A01G164000.1	Wheat	extracellular, vacuole	62.26	63.84
TraesCS5B01G161500.1	Wheat	extracellular	61.98	63.56
TraesCS5D01G169000.1	Wheat	extracellular	61.43	62.99
Os09t0132200-01	Rice	extracellular	60.88	62.96
EES16382	Sorghum	extracellular, golgi	56.2	55.89
EER94394	Sorghum	extracellular	50.41	51.26
Bra004735.1-P	Field mustard	extracellular	45.18	48.66
AT2G42990.1	Thale cress	extracellular	46.56	48.29
CDY29250	Canola	extracellular	46.01	47.58
Bra026402.1-P	Field mustard	extracellular	46.01	47.58
KRH14826	Soybean	endoplasmic reticulum, extracellular	45.18	47.4
CDX89302	Canola	extracellular	45.73	47.29
CDY53653	Canola	extracellular, plasma membrane	45.45	47.14
CDY55498	Canola	extracellular, plasma membrane	45.45	47.14
KRH46013	Soybean	extracellular	45.45	47.14
AT4G26790.1	Thale cress	extracellular, golgi	45.45	47.01
Solyc07g049440.2.1	Tomato	extracellular	45.73	46.89
OQU84537	Sorghum	endoplasmic reticulum, extracellular	45.73	46.63
KRG98969	Soybean	extracellular	45.45	46.61
CDY15057	Canola	extracellular	45.18	46.59
CDX93056	Canola	extracellular	45.18	46.59
Bra013200.1-P	Field mustard	extracellular	45.18	46.59
VIT_19s0090g01160.t01	Wine grape	extracellular, golgi	44.08	46.51
KRH14825	Soybean	nucleus	45.73	46.37
KRH73315	Soybean	nucleus	45.18	45.81
PGSC0003DMT400001826	Potato	endoplasmic reticulum, extracellular, vacuole	44.9	45.79
AT2G04570.1	Thale cress	extracellular	44.08	45.71
KRH73314	Soybean	endoplasmic reticulum, extracellular	43.8	45.43
EER90082	Sorghum	golgi	46.01	45.38
EES04670	Sorghum	extracellular	47.11	45.36
KRH17906	Soybean	endoplasmic reticulum, extracellular	43.53	45.27
PGSC0003DMT400038808	Potato	golgi, plasma membrane	44.35	45.22
Solyc05g043330.2.1	Tomato	plasma membrane	43.8	44.54
PGSC0003DMT400001828	Potato	extracellular	42.7	43.91
Solyc07g049430.2.1	Tomato	extracellular	41.87	43.06
PGSC0003DMT400038810	Potato	extracellular	41.6	42.66
EER99270	Sorghum	extracellular, plasma membrane	41.05	41.39
Solyc05g043320.1.1	Tomato	cytosol	24.24	38.6
KXG26546	Sorghum	mitochondrion, plastid	46.28	37.42
EER90469	Sorghum	extracellular, vacuole	38.84	37.3
EES03823	Sorghum	plasma membrane	35.81	37.25
OQU78161	Sorghum	extracellular	37.74	35.31
EER88779	Sorghum	extracellular, golgi, mitochondrion, plastid	35.81	34.12
EER97970	Sorghum	plastid	35.26	33.33
KXG34395	Sorghum	plastid	34.71	32.14
KXG38464	Sorghum	cytosol	36.91	31.46
EER87686	Sorghum	extracellular	34.99	28.6
OQU84135	Sorghum	plasma membrane	38.02	26.44
VIT_12s0059g01590.t01	Wine grape	extracellular	45.45	25.08
KXG38704	Sorghum	endoplasmic reticulum, plasma membrane	33.61	16.22

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:8062588	UniProt:C5X6Q5	ncoils:Coil	EnsemblPlants:EER96404
ProteinID:EER96404	ProteinID:EER96404.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:IPR036514	PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF269	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	EnsemblPlantsGene:SORBI_3002G141100	SUPFAM:SSF52266	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83685
RefSeq:XP_002459883.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:22774010..22786460

Molecular Weight (calculated)

39508.9 Da

IEP (calculated)

5.175

GRAVY (calculated)

0.068

Length

363 amino acids

Sequence
(BLAST)

001: MSSQGSLWCF WLLLLLLLLV HFSGSASSSR ATAVKQQVSA FIVFGDSTVD TGNNNFIPTI AKANFPPYGR DFNGGVATGR FSNGRLVTDF ISEAFGLPST
101: LPAYLDPSHT IDQLAKGVSF ASGATGLDDL TAKFTSVIPL GQQLEYFKEY KARLEAAKGE SMASKIIADA VYIFSIGTND FILNYFTLPI RPFQYTPTEY
201: VSYLVRLAGA AARDAYHLGA RRMGFTGLPP FGCLPLSRTR NHGEPRECNE EYNRLAMRFN AELQEAVAKL NGDLAGALLV YVGDTYSVLS DIVANPSDYG
301: FENVAQGCCG TGLIETAVFC GLDEPLTCHD VDKYAFFDSA HPSERVYRIL ADRILNSTSG VFL

Best Arabidopsis Sequence Match ( AT2G42990.1 )
(BLAST)

001: MATHYLSPSI LCIILTTLVS IAGAKIPAII VFGDSSVDSG NNNFISTMAR ANFEPYGRDF PGGRATGRFC NGRLSSDFTS EAYGLKPTVP AYLDPSYNIS
101: DFATGVCFAS AGTGYDNSTA DVLGVIPLWK EVEYFKEYQS NLSAYLGHRR AAKIIRESLY IVSIGTNDFL ENYYTLPDRR SQFSISQYQD FLVEIAEVFL
201: KDIYRLGARK MSFTGISPMG CLPLERVTNL DDPFSCARSY NDLAVDFNGR LRRLVTKLNR ELTGIKIYFA NPYDIMWDIV TKPNLYGLEI SSSACCGTGL
301: FEMGFLCGQD NPLTCSDANK FVFWDAFHPT ERTNQIVSDH FFKHLKNLFH

Arabidopsis Description

GDSL esterase/lipase At2g42990 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZI9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.