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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 2
  • golgi 2
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 EES02290 AT3G16310.1 21798944
AT1G75880.1 EES19830 AT3G16310.1 21798944
AT1G75880.1 OQU75676 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97970 Sorghum plastid 80.87 82.55
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 67.6 69.55
Solyc04g081790.2.1 Tomato extracellular, plasma membrane 41.58 46.57
VIT_18s0001g14810.t01 Wine grape cytosol 40.82 46.24
KRH17462 Soybean extracellular, plasma membrane, plastid 42.6 45.5
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 41.33 45.13
VIT_18s0001g14760.t01 Wine grape extracellular 31.89 44.8
EER99270 Sorghum extracellular, plasma membrane 41.07 44.72
CDX87653 Canola cytosol 34.44 44.12
Bra015803.1-P Field mustard cytosol 38.78 43.93
PGSC0003DMT400070969 Potato extracellular 23.98 43.93
KRH55991 Soybean extracellular 40.56 43.92
Bra015804.1-P Field mustard cytosol 34.18 43.79
KRH17461 Soybean nucleus 41.07 43.75
KRH05977 Soybean nucleus 41.33 43.55
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 40.31 43.41
KRH17460 Soybean nucleus 40.05 43.37
KRH55993 Soybean extracellular 40.05 43.37
KRH28831 Soybean plasma membrane 40.31 43.17
Bra015802.1-P Field mustard extracellular 39.8 43.09
CDX68113 Canola endoplasmic reticulum, plasma membrane 39.8 43.09
CDX87651 Canola extracellular 39.8 43.09
Bra003736.1-P Field mustard extracellular, plasma membrane 39.54 42.82
CDX73211 Canola extracellular 39.54 42.82
CDX85929 Canola endoplasmic reticulum, plasma membrane 39.54 42.82
Solyc04g081770.2.1 Tomato cytosol 37.24 42.82
KRH55990 Soybean extracellular, plasma membrane, vacuole 39.8 42.74
KRH05978 Soybean plastid 41.07 42.71
CDX87652 Canola golgi, plasma membrane 39.54 42.7
VIT_18s0001g14780.t01 Wine grape plasma membrane 36.48 42.56
KRH17463 Soybean endoplasmic reticulum, golgi 39.29 42.42
Solyc06g048670.2.1 Tomato extracellular 38.01 42.21
CDY64565 Canola extracellular 34.44 42.19
KRH51682 Soybean extracellular, golgi 39.03 42.03
CDY41727 Canola extracellular 34.95 42.02
CDY53577 Canola extracellular 34.95 42.02
KRH61019 Soybean extracellular, plasma membrane 38.27 42.02
KRH51683 Soybean plasma membrane 30.61 41.96
KRH05976 Soybean nucleus 39.8 41.94
CDY09420 Canola extracellular 34.18 41.88
Solyc12g089350.1.1 Tomato extracellular, golgi 36.73 41.74
CDX73210 Canola golgi, mitochondrion, plasma membrane 39.29 41.73
CDY41728 Canola extracellular 34.44 41.41
PGSC0003DMT400025569 Potato extracellular 37.24 41.36
Solyc04g081800.1.1 Tomato extracellular, plasma membrane 37.76 41.34
KRH05980 Soybean endoplasmic reticulum, golgi 38.27 41.32
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 38.27 41.21
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 38.27 41.21
AT1G75880.1 Thale cress golgi, plasma membrane 39.29 41.07
CDY51993 Canola plasma membrane 33.42 41.07
CDY42062 Canola cytosol 30.1 40.97
CDY70534 Canola plasma membrane 39.03 40.91
KRH51681 Soybean extracellular, plasma membrane 37.24 40.9
PGSC0003DMT400075642 Potato extracellular 37.5 40.83
KRH69753 Soybean extracellular, plasma membrane, vacuole 38.01 40.82
CDY53562 Canola extracellular 25.77 40.73
KRH08025 Soybean extracellular, vacuole 38.01 40.71
PGSC0003DMT400025568 Potato extracellular 36.22 40.57
CDY48852 Canola extracellular 33.67 40.49
AT3G14820.1 Thale cress extracellular, plasma membrane 36.22 40.46
CDY36116 Canola extracellular, plasma membrane 32.91 40.44
Bra026636.1-P Field mustard extracellular 35.97 40.4
Bra027951.1-P Field mustard extracellular 35.97 40.4
CDX85928 Canola plasma membrane 38.52 40.37
Bra003737.1-P Field mustard cytosol, plastid 33.16 40.37
AT3G43570.1 Thale cress extracellular 32.91 40.31
AT3G43550.1 Thale cress extracellular 29.59 40.28
Bra010987.1-P Field mustard plasma membrane 35.71 40.23
CDY65553 Canola extracellular 33.67 40.0
AT5G42170.1 Thale cress extracellular 37.5 39.84
CDY53576 Canola extracellular 33.93 39.7
Solyc04g081780.2.1 Tomato extracellular 34.69 39.65
Solyc04g081760.2.1 Tomato extracellular 26.79 39.62
Bra027858.1-P Field mustard extracellular 35.2 39.54
Bra027859.1-P Field mustard extracellular 35.2 39.54
KRH69760 Soybean extracellular 36.48 39.5
EER90469 Sorghum extracellular, vacuole 38.01 39.42
AT1G58725.1 Thale cress extracellular 34.95 39.26
AT1G59030.1 Thale cress extracellular, plasma membrane 34.95 39.26
AT1G59406.1 Thale cress extracellular 34.95 39.26
Bra027950.1-P Field mustard extracellular 34.95 39.14
AT1G58525.1 Thale cress extracellular 33.93 38.89
CDY20086 Canola extracellular, plasma membrane 34.44 38.68
EES03823 Sorghum plasma membrane 34.44 38.68
KRH08023 Soybean extracellular 28.57 38.36
CDY32339 Canola extracellular, plasma membrane 34.18 38.18
AT1G75890.3 Thale cress plastid 37.76 37.47
KXG38464 Sorghum cytosol 39.03 35.92
Bra035295.1-P Field mustard mitochondrion 26.28 35.76
CDY02386 Canola golgi 35.71 35.71
CDY44206 Canola plasma membrane 33.93 34.82
EER96404 Sorghum extracellular, vacuole 32.14 34.71
OQU76903 Sorghum plastid 31.38 33.88
CDY69331 Canola cytosol 22.19 33.72
AT1G20120.1 Thale cress plasma membrane 34.44 33.58
Bra016475.1-P Field mustard plastid 32.4 33.51
AT1G20132.1 Thale cress extracellular, vacuole 32.65 33.42
EER94394 Sorghum extracellular 30.36 33.33
OQU84537 Sorghum endoplasmic reticulum, extracellular 29.08 32.02
EER90082 Sorghum golgi 29.59 31.52
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 33.67 31.5
CDY57591 Canola endoplasmic reticulum, plasma membrane 33.67 31.5
EES16382 Sorghum extracellular, golgi 29.08 31.23
OQU78161 Sorghum extracellular 30.36 30.67
CDY71031 Canola cytosol 7.65 30.0
EES04670 Sorghum extracellular 27.81 28.91
OQU84135 Sorghum plasma membrane 38.27 28.74
KXG26546 Sorghum mitochondrion, plastid 32.14 28.06
CDY71376 Canola plastid 34.95 27.96
CDY54336 Canola extracellular, golgi, plasma membrane 21.68 27.78
EER87686 Sorghum extracellular 31.12 27.48
AT1G20130.1 Thale cress mitochondrion 36.99 27.15
CDY12974 Canola golgi, mitochondrion 34.95 25.32
VIT_18s0001g14770.t01 Wine grape plastid 39.03 24.36
CDY44205 Canola plasma membrane 31.12 22.1
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 38.01 21.16
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 34.69 18.09
Bra012212.1-P Field mustard plastid 34.18 16.94
CDY67439 Canola plasma membrane 34.95 15.27
CDY29371 Canola plasma membrane 33.42 15.06
Bra025794.1-P Field mustard plasma membrane 33.67 14.83
Protein Annotations
EnsemblPlants:KXG34395EnsemblPlantsGene:SORBI_3002G033100Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF242PFAM:PF00657ProteinID:KXG34395ProteinID:KXG34395.1SEG:segSUPFAM:SSF52266
UniParc:UPI00081AE85CUniProt:A0A1B6Q8Z0MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr2:+:3035609..3041258
Molecular Weight (calculated)
42579.1 Da
IEP (calculated)
7.651
GRAVY (calculated)
0.053
Length
392 amino acids
Sequence
(BLAST)
001: MAASQSLTPC LCTGNAHAPW CRFVRALLVA TAAALVVVVV HADEATTTTA AAGGFAAATN DHQRPKIPAI FVFGDSIVDP GNTNNRLTEA RANFPPYGQD
101: FPGGVATGRF SNGLVPGDLL ASKLGIKELL PPFLSPDLEL KDLLTGVAFA CGGSGYDPLT STLATTLSST DQLKLFHDYK QKLTALVGEK EMTRVISQGV
201: FFTLMGANDI INNYFLLPLR RHQYDLPSYV DFLVSSAINF TKTLNDMGAK RIGFVGVPPL GCCPSQITLG ESTSRQCELL RNQASQLYNS RISKEIKRLN
301: AEQSASRSKI VYFDIYYNLL DLIQNPASYG FKDVNKGCCG STVLNAAIFI AYQSACPNAI DYIFWDGFHP TEKAYKIVVD KLVQQASEFL LR
Best Arabidopsis Sequence Match ( AT1G75890.3 )
(BLAST)
001: MLNFHMSIQA LHIYIYSSFQ KLPKKQRVTM KRNSINIHHV TSFSSSPFWC VFFLVLLCKT STNALVKQPP NETTPAIIVF GDSIVDAGNN DDIMTTLARC
101: NYPPYGIDFD GGIPTGRFCN GKVATDFIAG KFGIKPSIPA YRNPNLKPED LLTGVTFASG GAGYVPFTTQ LSGGIALSQQ LKLFEEYVEK MKKMVGEERT
201: KLIIKNSLFM VICGSNDITN TYFGLPSVQQ QYDVASFTTL MADNARSFAQ KLHEYGARRI QVFGAPPVGC VPSQRTLAGG PTRNCVVRFN DATKLYNVKL
301: AANLGSLSRT LGDKTIIYVD IYDSLLDIIL DPRQYGFKVV DKGCCGTGLI EVALLCNNFA ADVCPNRDEY VFWDSFHPTE KTYRIMATKY FERYV
Arabidopsis Description
GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT1G75890]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.