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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400001535
PGSC0003DMT400006495
PGSC0003DMT400071510
PGSC0003DMT400071835
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75880.1 PGSC0003DMT400006495 AT3G16310.1 21798944
AT1G75880.1 PGSC0003DMT400071510 AT4G19030.1 21798944
AT1G75880.1 PGSC0003DMT400073246 AT4G19030.1 21798944
AT1G75880.1 PGSC0003DMT400001535 AT5G24290.1 21798944
AT1G75880.1 PGSC0003DMT400071835 AT5G24290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g081760.2.1 Tomato extracellular 69.71 92.08
PGSC0003DMT400025569 Potato extracellular 83.43 82.72
PGSC0003DMT400075642 Potato extracellular 70.86 68.89
PGSC0003DMT400070969 Potato extracellular 36.0 58.88
KRH51682 Soybean extracellular, golgi 60.86 58.52
KRH05980 Soybean endoplasmic reticulum, golgi 60.0 57.85
VIT_18s0001g14790.t01 Wine grape endoplasmic reticulum, golgi 59.14 57.66
KRH61020 Soybean endoplasmic reticulum, golgi, plastid 59.71 57.42
VIT_18s0001g14810.t01 Wine grape cytosol 56.57 57.23
KRH17463 Soybean endoplasmic reticulum, golgi 59.14 57.02
VIT_18s0001g14760.t01 Wine grape extracellular 45.43 56.99
CDX73211 Canola extracellular 57.14 55.25
Bra003736.1-P Field mustard extracellular, plasma membrane 56.86 54.97
CDX85929 Canola endoplasmic reticulum, plasma membrane 56.86 54.97
KRH61019 Soybean extracellular, plasma membrane 56.0 54.9
Bra015802.1-P Field mustard extracellular 56.57 54.7
CDX87651 Canola extracellular 56.57 54.7
CDX68113 Canola endoplasmic reticulum, plasma membrane 56.29 54.42
VIT_18s0001g14780.t01 Wine grape plasma membrane 51.71 53.87
KRH51681 Soybean extracellular, plasma membrane 54.86 53.78
AT1G75900.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 55.71 53.57
CDX87653 Canola cytosol 46.29 52.94
VIT_18s0001g14800.t01 Wine grape extracellular, golgi 54.86 52.75
KRH17461 Soybean nucleus 55.43 52.72
KRH05977 Soybean nucleus 56.0 52.69
Bra015804.1-P Field mustard cytosol 46.0 52.61
KRH17460 Soybean nucleus 54.29 52.49
Bra015803.1-P Field mustard cytosol 51.43 52.02
KRH05976 Soybean nucleus 54.29 51.08
CDY42062 Canola cytosol 41.71 50.69
GSMUA_Achr5P11240_001 Banana extracellular, golgi 51.71 50.14
KRH17462 Soybean extracellular, plasma membrane, plastid 52.57 50.14
KRH51683 Soybean plasma membrane 40.57 49.65
KRH05978 Soybean plastid 53.43 49.6
CDX87652 Canola golgi, plasma membrane 51.14 49.31
CDY53562 Canola extracellular 34.86 49.19
Bra003737.1-P Field mustard cytosol, plastid 44.86 48.76
EER99270 Sorghum extracellular, plasma membrane 50.0 48.61
AT1G75880.1 Thale cress golgi, plasma membrane 52.0 48.53
AT5G42170.1 Thale cress extracellular 50.86 48.24
CDX73210 Canola golgi, mitochondrion, plasma membrane 50.86 48.24
GSMUA_Achr4P25550_001 Banana extracellular, golgi, vacuole 50.0 48.21
Bra035295.1-P Field mustard mitochondrion 39.43 47.92
CDY65553 Canola extracellular 45.14 47.88
AT3G14820.1 Thale cress extracellular, plasma membrane 48.0 47.86
CDY70534 Canola plasma membrane 51.14 47.86
CDY20086 Canola extracellular, plasma membrane 47.71 47.85
GSMUA_Achr11P... Banana endoplasmic reticulum, vacuole 45.14 47.73
CDX85928 Canola plasma membrane 50.86 47.59
CDY48852 Canola extracellular 44.29 47.55
CDY32339 Canola extracellular, plasma membrane 47.43 47.29
Bra027858.1-P Field mustard extracellular 47.14 47.28
AT1G58725.1 Thale cress extracellular 46.86 46.99
AT1G59030.1 Thale cress extracellular, plasma membrane 46.86 46.99
AT1G59406.1 Thale cress extracellular 46.86 46.99
CDY69331 Canola cytosol 34.57 46.9
Bra027859.1-P Field mustard extracellular 46.57 46.7
GSMUA_Achr4P25560_001 Banana extracellular, golgi 48.86 46.59
AT3G43570.1 Thale cress extracellular 42.57 46.56
AT3G43550.1 Thale cress extracellular 38.29 46.53
Os09t0540400-02 Rice extracellular, plasma membrane 48.57 46.45
Zm00001d032888_P001 Maize mitochondrion 48.29 46.3
CDY53577 Canola extracellular 42.86 46.01
CDY64565 Canola extracellular 42.0 45.94
AT1G58525.1 Thale cress extracellular 44.86 45.91
CDY36116 Canola extracellular, plasma membrane 41.71 45.77
Os02t0101400-01 Rice cytosol 36.86 45.74
CDY41727 Canola extracellular 42.57 45.71
Os10t0438600-01 Rice plasma membrane 46.57 45.53
CDY09420 Canola extracellular 41.43 45.31
TraesCS1A01G135900.1 Wheat plastid 48.0 45.16
CDY51993 Canola plasma membrane 41.14 45.14
CDY41728 Canola extracellular 42.0 45.09
EER90469 Sorghum extracellular, vacuole 48.57 44.97
TraesCS1D01G138700.1 Wheat endoplasmic reticulum, vacuole 47.71 44.77
TraesCS1B01G156300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 47.43 44.62
Bra026636.1-P Field mustard extracellular 44.29 44.41
Bra010987.1-P Field mustard plasma membrane 44.0 44.25
HORVU1Hr1G036440.1 Barley endoplasmic reticulum, extracellular, plastid 46.86 44.09
Bra027951.1-P Field mustard extracellular 43.71 43.84
Os03t0859100-01 Rice golgi 45.71 43.84
HORVU6Hr1G001510.1 Barley endoplasmic reticulum, vacuole 48.0 43.64
CDY53576 Canola extracellular 41.71 43.58
AT1G20120.1 Thale cress plasma membrane 49.71 43.28
Bra016475.1-P Field mustard plastid 46.86 43.27
CDY02386 Canola golgi 48.29 43.11
PGSC0003DMT400068453 Potato cytosol 42.29 42.9
TraesCS5A01G327300.1 Wheat cytosol 27.14 42.79
Bra027950.1-P Field mustard extracellular 42.57 42.57
GSMUA_Achr4P25720_001 Banana vacuole 44.0 42.54
Zm00001d034917_P001 Maize mitochondrion 45.43 42.29
TraesCS7A01G339400.1 Wheat extracellular 42.29 42.29
Zm00001d022615_P001 Maize mitochondrion, plasma membrane 49.43 42.2
TraesCS1A01G322600.1 Wheat mitochondrion 47.43 42.13
AT1G20132.1 Thale cress extracellular, vacuole 46.0 42.04
AT1G75890.3 Thale cress plastid 47.43 42.03
TraesCS7B01G250800.1 Wheat extracellular 42.0 42.0
TraesCS6B01G139100.1 Wheat extracellular, golgi 42.0 41.88
TraesCS6A01G111000.1 Wheat extracellular, golgi 41.71 41.6
TraesCS4A01G316500.1 Wheat golgi 44.29 41.55
Bra012211.1-P Field mustard endoplasmic reticulum, plasma membrane 49.71 41.53
CDY57591 Canola endoplasmic reticulum, plasma membrane 49.71 41.53
TraesCS5B01G562600.1 Wheat golgi, mitochondrion 44.0 41.51
TraesCS5D01G566800.1 Wheat endoplasmic reticulum, golgi 44.0 41.51
TraesCS7D01G347000.1 Wheat extracellular 41.43 41.43
TraesCS1D01G322600.1 Wheat mitochondrion, plastid 46.57 41.37
TraesCS4B01G010200.1 Wheat endoplasmic reticulum 43.71 41.35
HORVU5Hr1G125000.1 Barley vacuole 43.71 41.24
TraesCS6D01G002800.1 Wheat mitochondrion 48.0 41.08
TraesCS2A01G477400.1 Wheat golgi, vacuole 42.57 41.05
Os10t0140300-01 Rice plasma membrane 40.86 40.97
PGSC0003DMT400058744 Potato plasma membrane 42.57 40.93
TraesCS4A01G303600.1 Wheat cytosol 24.57 40.76
Os06t0351500-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 43.43 40.21
TraesCS6B01G007700.1 Wheat plastid 48.0 40.19
CDY71031 Canola cytosol 11.43 40.0
TraesCS2B01G500500.1 Wheat mitochondrion 42.57 39.84
TraesCS2D01G476600.1 Wheat mitochondrion 42.57 39.84
PGSC0003DMT400086168 Potato extracellular 36.0 39.75
KXG38464 Sorghum cytosol 48.29 39.67
TraesCS7B01G250700.1 Wheat extracellular, vacuole 40.0 39.66
TraesCS2B01G297300.1 Wheat plasma membrane 39.71 39.6
HORVU7Hr1G083440.4 Barley extracellular 40.0 39.44
PGSC0003DMT400001828 Potato extracellular 39.71 39.38
TraesCS2D01G278500.1 Wheat plasma membrane, vacuole 39.43 39.32
CDY44206 Canola plasma membrane 42.86 39.27
TraesCS7D01G346700.1 Wheat extracellular 39.71 39.15
EER88779 Sorghum extracellular, golgi, mitochondrion, plastid 42.57 39.11
HORVU7Hr1G083530.2 Barley golgi 42.29 39.05
CDY54336 Canola extracellular, golgi, plasma membrane 34.0 38.89
TraesCS1B01G334900.1 Wheat plastid 47.14 38.82
TraesCS5B01G562700.1 Wheat golgi 42.0 38.38
PGSC0003DMT400038808 Potato golgi, plasma membrane 38.86 38.2
HORVU2Hr1G107400.3 Barley mitochondrion 24.29 38.12
TraesCS4A01G316400.1 Wheat mitochondrion 42.0 37.98
TraesCS6D01G093000.1 Wheat extracellular, plasma membrane 39.71 37.98
PGSC0003DMT400001826 Potato endoplasmic reticulum, extracellular, vacuole 38.29 37.64
EER97970 Sorghum plastid 41.14 37.5
TraesCS6B01G133500.1 Wheat extracellular 38.86 37.47
TraesCS6A01G104300.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.0 37.43
TraesCS5D01G566700.1 Wheat mitochondrion 42.29 36.72
PGSC0003DMT400038810 Potato extracellular 37.14 36.72
HORVU2Hr1G068430.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane 39.43 36.51
Zm00001d018791_P001 Maize plastid 40.57 36.5
KXG34395 Sorghum plastid 40.57 36.22
TraesCS6A01G002700.1 Wheat mitochondrion 48.29 36.03
PGSC0003DMT400027838 Potato extracellular 36.29 35.47
TraesCS7D01G346900.1 Wheat endoplasmic reticulum, plasma membrane, plastid 24.29 35.42
HORVU6Hr1G018750.1 Barley endoplasmic reticulum, plasma membrane 39.14 35.22
HORVU5Hr1G124980.2 Barley plastid 41.14 35.21
Zm00001d014918_P001 Maize mitochondrion 47.14 34.81
TraesCS7A01G339300.1 Wheat cytosol 26.29 33.7
OQU84135 Sorghum plasma membrane 47.14 31.61
VIT_18s0001g14770.t01 Wine grape plastid 56.57 31.53
CDY12974 Canola golgi, mitochondrion 48.57 31.42
CDY71376 Canola plastid 42.0 30.0
AT1G20130.1 Thale cress mitochondrion 41.14 26.97
CDY44205 Canola plasma membrane 39.14 24.82
PGSC0003DMT400025571 Potato cytosol, plasma membrane, plastid 47.71 23.72
Zm00001d014308_P001 Maize endoplasmic reticulum 39.14 20.98
Bra012212.1-P Field mustard plastid 41.71 18.46
KXG38704 Sorghum endoplasmic reticulum, plasma membrane 38.86 18.09
CDY29371 Canola plasma membrane 41.14 16.55
CDY67439 Canola plasma membrane 42.29 16.5
Bra025794.1-P Field mustard plasma membrane 40.86 16.07
PGSC0003DMT400091356 Potato cytosol, nucleus, plasma membrane 35.14 15.61
Protein Annotations
EnsemblPlants:PGSC0003DMT400025568EnsemblPlantsGene:PGSC0003DMG401009879Gene3D:3.40.50.1110GO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likePANTHER:PTHR22835
PANTHER:PTHR22835:SF471PFAM:PF00657PGSC:PGSC0003DMG401009879SEG:segSignalP:SignalP-noTMSUPFAM:SSF52266
UniParc:UPI000295CC14UniProt:M1ALM2MapMan:35.1:::
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG401009879]
Coordinates
chr4:+:71096999..71101030
Molecular Weight (calculated)
38576.4 Da
IEP (calculated)
4.783
GRAVY (calculated)
-0.004
Length
350 amino acids
Sequence
(BLAST)
001: MVIFFLSFLL LFINYCEGKV QLPKNVVVKA VFAFGDSIVD QGSNNYVATI VKCDFPPYGK DFNGGMPTGR FSNGKTPPDL IVEELGIKDF VPAYLDPNLK
101: IEDLKTGVSF ASGGCGYDPL TATIVSAIPL STQLNQFKEY IGKLEGLVGE EEANDIFKNS LFLVVAGSDD LANTYFTAGV RLKKDVNSYT DLMVAKASEF
201: VQELYNLGAR KIGIFGIPPI GCLPAQRTLA GGLHRVCSEE YNEAAQMANT KFSTEIDSLS KKLAQSKLVF LDIYNPLLDL IVNPQKYGFE EVDKGCCGTG
301: KIEVTVLCNK FSGTCEDDTK YLFWDSYHPT EKGYKILVDQ VLNKNVNKFF
Best Arabidopsis Sequence Match ( AT1G75900.1 )
(BLAST)
001: MKDNSSWSCS CSWSSWKICL LSVLFLTETI TAVKLPPKLI IPAVIAFGDS IVDTGMNNNV KTVVKCDFLP YGINFQSGVA TGRFCDGRVP ADLLAEELGI
101: KSIVPAYLDP NLKSKDLLTG VSFASGGSGY DPITPKLVAV ISLEDQLSYF EEYIEKVKNI VGEARKDFIV ANSLFLLVAG SDDIANTYYT LRARPEYDVD
201: SYTTLMSDSA SEFVTKLYGY GVRRVAVFGA PPIGCVPSQR TLGGGILRDC ADNYNEAAKL FNSKLSPKLD SLRKTLPGIK PIYINIYDPL FDIIQNPANY
301: GFEVSNKGCC GTGAIEVAVL CNKITSSVCP DVSTHVFWDS YHPTEKTYKV LVSLLINKFV NQFV
Arabidopsis Description
EXL3GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.