Factsheet for Zm00001d018791_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d035875_P002
Zm00001d038803_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75880.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT1G75880.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT1G75880.1	Zm00001d038803_P001	AT3G16310.1	21798944
AT1G75880.1	Zm00001d035875_P002	AT5G24290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97970	Sorghum	plastid	80.21	81.25
VIT_18s0001g14810.t01	Wine grape	cytosol	41.13	46.24
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	40.87	45.43
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	41.9	45.4
PGSC0003DMT400070969	Potato	extracellular	24.68	44.86
VIT_18s0001g14760.t01	Wine grape	extracellular	31.88	44.44
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	41.39	44.23
CDX87653	Canola	cytosol	34.7	44.12
Zm00001d032888_P001	Maize	mitochondrion	41.39	44.11
Bra015804.1-P	Field mustard	cytosol	34.45	43.79
VIT_18s0001g14780.t01	Wine grape	plasma membrane	37.79	43.75
KRH17463	Soybean	endoplasmic reticulum, golgi	40.62	43.53
KRH17461	Soybean	nucleus	41.13	43.48
Solyc04g081770.2.1	Tomato	cytosol	38.05	43.4
KRH55991	Soybean	extracellular	40.36	43.37
Bra015803.1-P	Field mustard	cytosol	38.56	43.35
KRH55993	Soybean	extracellular	40.1	43.09
KRH05977	Soybean	nucleus	41.13	43.01
KRH05980	Soybean	endoplasmic reticulum, golgi	40.1	42.98
KRH28831	Soybean	plasma membrane	40.36	42.9
KRH51682	Soybean	extracellular, golgi	40.1	42.86
KRH17460	Soybean	nucleus	39.85	42.82
KRH51681	Soybean	extracellular, plasma membrane	39.07	42.58
PGSC0003DMT400025569	Potato	extracellular	38.56	42.49
CDY42062	Canola	cytosol	31.36	42.36
Solyc12g089350.1.1	Tomato	extracellular, golgi	37.53	42.32
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	39.59	42.31
KRH61019	Soybean	extracellular, plasma membrane	38.82	42.3
Solyc04g081780.2.1	Tomato	extracellular	37.28	42.27
Bra015802.1-P	Field mustard	extracellular	39.33	42.27
CDX87651	Canola	extracellular	39.33	42.27
KRH17462	Soybean	extracellular, plasma membrane, plastid	39.85	42.23
Solyc06g048670.2.1	Tomato	extracellular	38.3	42.21
KRH55990	Soybean	extracellular, plasma membrane, vacuole	39.59	42.19
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	38.82	42.18
CDX87652	Canola	golgi, plasma membrane	39.33	42.15
CDX73211	Canola	extracellular	39.07	41.99
CDX85929	Canola	endoplasmic reticulum, plasma membrane	39.07	41.99
CDY64565	Canola	extracellular	34.45	41.88
KRH05978	Soybean	plastid	40.36	41.64
Bra003736.1-P	Field mustard	extracellular, plasma membrane	38.56	41.44
CDX68113	Canola	endoplasmic reticulum, plasma membrane	38.56	41.44
KRH05976	Soybean	nucleus	39.59	41.4
PGSC0003DMT400075642	Potato	extracellular	38.3	41.39
KRH51683	Soybean	plasma membrane	30.33	41.26
AT3G43570.1	Thale cress	extracellular	33.93	41.25
CDY09420	Canola	extracellular	33.93	41.25
CDY41727	Canola	extracellular	34.45	41.1
KRH69753	Soybean	extracellular, plasma membrane, vacuole	38.56	41.1
CDY51993	Canola	plasma membrane	33.68	41.07
AT1G75900.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	38.3	40.93
CDX73210	Canola	golgi, mitochondrion, plasma membrane	38.82	40.92
CDY48852	Canola	extracellular	34.19	40.8
Zm00001d022615_P001	Maize	mitochondrion, plasma membrane	42.93	40.73
CDY65553	Canola	extracellular	34.45	40.61
PGSC0003DMT400025568	Potato	extracellular	36.5	40.57
CDY41728	Canola	extracellular	33.93	40.49
CDY53577	Canola	extracellular	33.93	40.49
KRH08025	Soybean	extracellular, vacuole	38.05	40.44
Bra026636.1-P	Field mustard	extracellular	36.25	40.4
AT5G42170.1	Thale cress	extracellular	38.3	40.38
AT1G58525.1	Thale cress	extracellular	35.48	40.35
CDY36116	Canola	extracellular, plasma membrane	32.9	40.13
AT1G58725.1	Thale cress	extracellular	35.99	40.11
AT1G59030.1	Thale cress	extracellular, plasma membrane	35.99	40.11
AT1G59406.1	Thale cress	extracellular	35.99	40.11
KRH69760	Soybean	extracellular	37.28	40.06
Bra010987.1-P	Field mustard	plasma membrane	35.73	39.94
AT3G43550.1	Thale cress	extracellular	29.56	39.93
CDY53562	Canola	extracellular	25.45	39.92
Bra027858.1-P	Field mustard	extracellular	35.73	39.83
Bra027859.1-P	Field mustard	extracellular	35.73	39.83
Bra027951.1-P	Field mustard	extracellular	35.73	39.83
CDY53576	Canola	extracellular	34.19	39.7
Solyc04g081760.2.1	Tomato	extracellular	26.99	39.62
AT3G14820.1	Thale cress	extracellular, plasma membrane	35.73	39.6
AT1G75880.1	Thale cress	golgi, plasma membrane	38.05	39.47
Bra003737.1-P	Field mustard	cytosol, plastid	32.65	39.44
CDY70534	Canola	plasma membrane	37.79	39.3
CDY20086	Canola	extracellular, plasma membrane	35.22	39.26
CDX85928	Canola	plasma membrane	37.53	39.04
Zm00001d034917_P001	Maize	mitochondrion	37.53	38.83
Bra027950.1-P	Field mustard	extracellular	34.7	38.57
CDY32339	Canola	extracellular, plasma membrane	34.7	38.46
CDY02386	Canola	golgi	37.28	36.99
AT1G75890.3	Thale cress	plastid	37.53	36.96
Bra035295.1-P	Field mustard	mitochondrion	27.25	36.81
Zm00001d012476_P001	Maize	plasma membrane	33.16	36.65
AT1G20132.1	Thale cress	extracellular, vacuole	35.48	36.03
KRH08023	Soybean	extracellular	26.74	35.62
CDY44206	Canola	plasma membrane	34.96	35.6
Zm00001d038411_P001	Maize	extracellular	31.11	34.57
Zm00001d014487_P001	Maize	plastid	32.13	34.34
CDY69331	Canola	cytosol	22.36	33.72
AT1G20120.1	Thale cress	plasma membrane	34.7	33.58
Zm00001d036770_P001	Maize	mitochondrion	31.88	33.33
Bra016475.1-P	Field mustard	plastid	32.39	33.25
Zm00001d010584_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.33	33.15
Zm00001d015636_P001	Maize	extracellular	30.59	32.96
Zm00001d000061_P001	Maize	extracellular, golgi	29.56	32.76
Zm00001d046642_P001	Maize	extracellular, golgi	32.13	32.13
Zm00001d019855_P001	Maize	extracellular, golgi	29.05	32.1
Zm00001d015637_P001	Maize	extracellular	29.31	31.75
Zm00001d014918_P001	Maize	mitochondrion	38.56	31.65
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	33.93	31.5
CDY57591	Canola	endoplasmic reticulum, plasma membrane	33.93	31.5
Zm00001d053252_P001	Maize	extracellular, golgi, mitochondrion	27.76	31.21
CDY71031	Canola	cytosol	7.71	30.0
CDY71376	Canola	plastid	34.96	27.76
CDY54336	Canola	extracellular, golgi, plasma membrane	21.59	27.45
Zm00001d035871_P001	Maize	mitochondrion	30.59	26.62
AT1G20130.1	Thale cress	mitochondrion	36.5	26.59
CDY12974	Canola	golgi, mitochondrion	36.76	26.43
VIT_18s0001g14770.t01	Wine grape	plastid	40.36	25.0
CDY44205	Canola	plasma membrane	31.62	22.28
Zm00001d014308_P001	Maize	endoplasmic reticulum	35.73	21.29
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	37.53	20.74
Bra012212.1-P	Field mustard	plastid	33.42	16.43
CDY29371	Canola	plasma membrane	34.19	15.29
CDY67439	Canola	plasma membrane	35.22	15.27
Bra025794.1-P	Field mustard	plasma membrane	34.19	14.94

Protein Annotations

EntrezGene:100284218	Gene3D:3.40.50.1110	MapMan:35.1	UniProt:B6TRC2	EMBL:EU967537	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	GO:GO:0016788	InterPro:IPR006311	InterPro:IPR036514
ProteinID:ONM51292.1	PFAM:PF00657	PFscan:PS51318	PANTHER:PTHR22835	PANTHER:PTHR22835:SF242	InterPro:SGNH_hydro_sf
InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266	InterPro:TAT_signal	TMHMM:TMhelix	UniParc:UPI000182D7E6	EnsemblPlantsGene:Zm00001d018791
EnsemblPlants:Zm00001d018791_P001	EnsemblPlants:Zm00001d018791_T001	SEG:seg	:	:	:

Description

Anther-specific proline-rich protein APG

Coordinates

chr7:+:5299802..5301758

Molecular Weight (calculated)

41982.0 Da

IEP (calculated)

7.111

GRAVY (calculated)

-0.067

Length

389 amino acids

Sequence
(BLAST)

001: MASHSHRSRS PTAPCPSWGH AHAPRCRRRL VRALLLVAAL ALAAAGGGGR GSAAAAAAAT QQRIPAIFMF GDSIVDPGNN NNRLTEAKAN FPPYGQDFPG
101: GVATGRFSNG LVPGDLLASK LGIKELLPPF IGTDLQLEDL LTGVAFACGG SGYDPLTSKL ATTLSSADQL QLFQDYKDKL AALAGEEEME RVVSQAVYFT
201: VMGANDIVNN YFILPIRRHQ YDLSSYVDFL VSSAINFTRT LNDMGAQRIA FLGVPPLGCC PSQITLAGSP SRQCDPARNQ ASELYNSRVS KEIERLNAER
301: SGSGSKFVYV DIYYNLLDLI QNPASYGFKD VSEGCCGSTV LNAAIFIAYH SACPNAPDYI FWDGFHPTQK AYDIVVDKLI QQNSKYLMM

Best Arabidopsis Sequence Match ( AT1G75880.1 )
(BLAST)

001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAVGG IPLPQQLIYF EEYIEKLKQM VGEKRTKFII KNSLFVVICG SNDIANDFFT
201: LPPVRLHYTV ASFTALMADN ARSFAQTLYG YGARRILVFG APPIGCVPSQ RTVAGGPTRD CVARFNDAAK LFNTKLSANI DVLSRTLQDP TIIYIDIYSP
301: LLDLILNPHQ YGFKVANKGC CGTGLIEVTA LCNNYTASVC PIRSDYVFWD SFHPTEKAYR IIVAKLLDRY LNRFF

Arabidopsis Description

EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.