Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G200500.1 | Wheat | extracellular | 7.9 | 57.89 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 7.19 | 53.1 |
| OQU75676 | Sorghum | plasma membrane | 43.83 | 49.33 |
| Os06t0103800-01 | Rice | plasma membrane | 39.04 | 43.35 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 20.96 | 38.98 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 12.46 | 37.28 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 8.5 | 35.68 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 11.26 | 34.31 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 17.13 | 34.13 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 35.45 | 33.98 |
| CDX92847 | Canola | plastid | 11.02 | 33.82 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 35.45 | 33.67 |
| CDY31395 | Canola | plasma membrane | 7.9 | 33.67 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 34.25 | 33.41 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 13.17 | 33.03 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 34.85 | 32.84 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 12.22 | 27.95 |
| Solyc09g059460.2.1 | Tomato | cytosol | 16.53 | 27.44 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 12.93 | 27.0 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 15.57 | 26.75 |
| KRH66122 | Soybean | cytosol | 13.53 | 25.0 |
| AT4G27870.2 | Thale cress | nucleus | 22.99 | 24.58 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 18.32 | 24.52 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 17.72 | 24.1 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.85 | 23.89 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 16.53 | 23.75 |
| AT5G24290.1 | Thale cress | cytosol | 15.57 | 23.64 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 17.96 | 23.55 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 14.97 | 23.28 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 12.93 | 23.03 |
| CDY19019 | Canola | nucleus | 21.32 | 22.62 |
| CDX89222 | Canola | nucleus | 21.2 | 22.41 |
| Bra026302.1-P | Field mustard | nucleus | 20.96 | 22.21 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 21.68 | 22.05 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 15.33 | 21.59 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.97 | 21.04 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 14.85 | 20.91 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 14.85 | 20.91 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 14.85 | 20.77 |
| KRH72565 | Soybean | cytosol, nucleus | 13.41 | 20.18 |
| AT4G27860.3 | Thale cress | nucleus | 14.97 | 20.13 |
| CDY14269 | Canola | cytosol | 13.65 | 19.76 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 13.29 | 18.38 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 13.17 | 18.36 |
| Bra010393.1-P | Field mustard | nucleus | 14.73 | 17.42 |
| Solyc03g096800.2.1 | Tomato | nucleus | 21.68 | 15.58 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 8.86 | 15.45 |
Protein Annotations
| EnsemblPlants:Zm00001d035875_P002 | EnsemblPlants:Zm00001d035875_T002 | EnsemblPlantsGene:Zm00001d035875 | EntrezGene:103629364 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:AQK79817.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004DE847F | UniProt:A0A1D6LJ72 | MapMan:24.2.12.2 | : | : | : |
Description
Membrane protein of ER body-like protein
Coordinates
chr6:+:58228914..58237829
Molecular Weight (calculated)
91393.9 Da
IEP (calculated)
4.970
GRAVY (calculated)
-0.415
Length
835 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVERPMWE LKEEEEEPPQ LLMEAEEDDY EEEEDTSALL YTRERESMRK KMTTTMADLD LEMESSDSDS NAAASAAVEE EAAAAAQQSI FLDPTQGLWK
101: CRHCDWTHQR LSGPCTAEII LHSQQGHCKI ASNVDSLVQH QPLYSSPHKA SDHATGLGAE NQVEKQDNVS AQQTNHSSSN GNLENGSHSN GVHEISSSSE
201: TVTTIADGLK LITTIREGRQ HILPSWSGSL DHVSGGSTST SQVHEIEVEK EVSKGDVKVE EYDLEKILDE QETHDLYCPN CKSCITRRVI LKKRKRTVRQ
301: ETGKEPPKRP QLVEPPANAP SQTINQDSPE VFRCLSCFTF FIPTGCGFNI FRIFERRDVD QQVQSQHSSA SVENCGSWLL SCFRTIDSPK PLHNADSLEE
401: PLVSDSQRTD NITSVEENTP LHSDNTIGKA EQSNKPSPTG SQTTAATYEV KESFSQFHAS SKDVTGSTQK EAGHVVTVQR NGARQEQIPL SRPAVDTKTD
501: TSHLGHKEEF TQTEAGHVVT VQRNGARQEQ IPLSQPSGDT ANDSMHLGHK QDILEDIMAP SDNSTFFSPS FVKPVLTIPI KVLPGEDNQT VEKPTSVIRQ
601: PAEPEAPPHR VLAVPEAEAL VPAPSAERDE WDILKAVVYG GLVESITSLS VVSAAAASGA KTLDIFILGI ANLIGGLPVL YHNIADLRNT GDIAESSEQV
701: GHYWLELGRR SKYQLHMVIA ILSYILFGLL PPVIYGLSFR TSDNRENKVL VVAAASLLCI ALLAIGKAHV KRHRTYLTTL LYYLSIGFSS SGLSYVAGVL
801: LAKVLAHFGI IDQGGASAPA PPGLSFPEAA AWASY
101: CRHCDWTHQR LSGPCTAEII LHSQQGHCKI ASNVDSLVQH QPLYSSPHKA SDHATGLGAE NQVEKQDNVS AQQTNHSSSN GNLENGSHSN GVHEISSSSE
201: TVTTIADGLK LITTIREGRQ HILPSWSGSL DHVSGGSTST SQVHEIEVEK EVSKGDVKVE EYDLEKILDE QETHDLYCPN CKSCITRRVI LKKRKRTVRQ
301: ETGKEPPKRP QLVEPPANAP SQTINQDSPE VFRCLSCFTF FIPTGCGFNI FRIFERRDVD QQVQSQHSSA SVENCGSWLL SCFRTIDSPK PLHNADSLEE
401: PLVSDSQRTD NITSVEENTP LHSDNTIGKA EQSNKPSPTG SQTTAATYEV KESFSQFHAS SKDVTGSTQK EAGHVVTVQR NGARQEQIPL SRPAVDTKTD
501: TSHLGHKEEF TQTEAGHVVT VQRNGARQEQ IPLSQPSGDT ANDSMHLGHK QDILEDIMAP SDNSTFFSPS FVKPVLTIPI KVLPGEDNQT VEKPTSVIRQ
601: PAEPEAPPHR VLAVPEAEAL VPAPSAERDE WDILKAVVYG GLVESITSLS VVSAAAASGA KTLDIFILGI ANLIGGLPVL YHNIADLRNT GDIAESSEQV
701: GHYWLELGRR SKYQLHMVIA ILSYILFGLL PPVIYGLSFR TSDNRENKVL VVAAASLLCI ALLAIGKAHV KRHRTYLTTL LYYLSIGFSS SGLSYVAGVL
801: LAKVLAHFGI IDQGGASAPA PPGLSFPEAA AWASY
001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTDNKRNRLT PIYPSSLEKP SKQTVNKETQ NHDKEAADPD QDVDKETENQ KSHLTPIYPS PLEQPSKQII NKETQTEPML PPNAQSEIPN
401: SVEPRKGGNK VEILKSIVYG GLTESITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLT VHSLQELINE KPRKQTNTDD SPEEGEGEED RYEEVLGRRE
501: YSRIHRVIAI SSFVIFGLIP PLVYGFSFRK KMEKRQEYKV LAVYAVSLLC IVLLSIAKAY VSKKRDYVKT LFRYTTTATT ASGFSQFVGY LVSQWLEKSG
601: FYDDSPETQR V
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTDNKRNRLT PIYPSSLEKP SKQTVNKETQ NHDKEAADPD QDVDKETENQ KSHLTPIYPS PLEQPSKQII NKETQTEPML PPNAQSEIPN
401: SVEPRKGGNK VEILKSIVYG GLTESITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLT VHSLQELINE KPRKQTNTDD SPEEGEGEED RYEEVLGRRE
501: YSRIHRVIAI SSFVIFGLIP PLVYGFSFRK KMEKRQEYKV LAVYAVSLLC IVLLSIAKAY VSKKRDYVKT LFRYTTTATT ASGFSQFVGY LVSQWLEKSG
601: FYDDSPETQR V
Arabidopsis Description
vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.