Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G200500.1 | Wheat | extracellular | 7.98 | 52.63 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 7.58 | 50.44 |
| OQU75676 | Sorghum | plasma membrane | 40.03 | 40.57 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 14.89 | 40.14 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 23.4 | 39.2 |
| Zm00001d035875_P002 | Maize | nucleus | 43.35 | 39.04 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 12.9 | 35.4 |
| CDX92847 | Canola | plastid | 12.5 | 34.56 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 39.1 | 34.35 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 9.04 | 34.17 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 40.03 | 33.97 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 38.96 | 33.64 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 39.23 | 33.56 |
| CDY31395 | Canola | plasma membrane | 8.64 | 33.16 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 17.95 | 32.22 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 14.23 | 32.13 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 14.76 | 30.41 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 15.43 | 29.0 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 17.15 | 26.54 |
| Solyc09g059460.2.1 | Tomato | cytosol | 17.69 | 26.44 |
| KRH66122 | Soybean | cytosol | 15.82 | 26.33 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 17.02 | 24.66 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 17.42 | 24.39 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 20.21 | 24.36 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 20.35 | 24.02 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 18.09 | 23.41 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 14.49 | 23.24 |
| AT4G27870.2 | Thale cress | nucleus | 24.07 | 23.18 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 18.88 | 23.13 |
| AT5G24290.1 | Thale cress | cytosol | 16.89 | 23.09 |
| CDX89222 | Canola | nucleus | 24.07 | 22.91 |
| CDY19019 | Canola | nucleus | 23.94 | 22.87 |
| Bra026302.1-P | Field mustard | nucleus | 23.8 | 22.72 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 17.29 | 21.89 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 17.15 | 21.75 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 17.15 | 21.75 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 17.02 | 21.44 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 23.4 | 21.44 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 16.76 | 21.25 |
| KRH72565 | Soybean | cytosol, nucleus | 15.16 | 20.54 |
| CDY14269 | Canola | cytosol | 15.29 | 19.93 |
| AT4G27860.3 | Thale cress | nucleus | 16.36 | 19.81 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 15.56 | 19.53 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 15.56 | 19.37 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 11.57 | 18.16 |
| Bra010393.1-P | Field mustard | nucleus | 17.02 | 18.13 |
| Solyc03g096800.2.1 | Tomato | nucleus | 24.2 | 15.66 |
Protein Annotations
| MapMan:24.2.12.2 | EntrezGene:4339849 | EMBL:AK067892 | ProteinID:BAF18459.1 | ProteinID:BAS95726.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0010168 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 |
| GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | EnsemblPlantsGene:Os06g0103800 | EnsemblPlants:Os06t0103800-01 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF16 | UniProt:Q0DFB4 | TMHMM:TMhelix | UniParc:UPI0000E12631 | RefSeq:XP_015642960.1 | SEG:seg |
Description
Protein of unknown function DUF125, transmembrane family protein. (Os06t0103800-01)
Coordinates
chr6:+:266683..271990
Molecular Weight (calculated)
81778.6 Da
IEP (calculated)
4.872
GRAVY (calculated)
-0.493
Length
752 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVEKPWEL KEDVEIMTEE EEEDDSSNLL QARGRNKKHA LINGDEQQQQ QEEEEEEEVV EEHKSVFFDP TQVSEHVTEV SGKNEVTRVE QFVAKKEKAH
101: ETSSSKGKEL ETQENANSQE TNENSNNSSL ENRSPSNGSH EVCNSGETVT VANGKAGLKV ITIIDKNQNG LANSNGSLHI ANVSMNKTSV HEIEAEKDED
201: VIKGKVNIEE YDLEKILDEQ ETHDLFCPNC NSCITQRVIL RKRKRTVRQT SPDEPPKKTQ IAEPSANTSN QTVPERQGQE SPDIFRCLSC FAFFIPTGCG
301: FNIFRIFGRT EVNQEAQVQE AAASGQMSGS DNCASWLFSC FEPGDGPKKT DAGPEKEPLL PDKQDSNNGS ASSVEGSTAS VHSHGISVQQ QESKRPLPAE
401: SSSQLQPSNT KKEDFGTVSF SGSSSVEAPS SSSASIINPG QTATGFLQTG ETHVVIGQQD IVLQQNVPLP KPGDAAHLDK QKQETPPASH TFPTPGVKIP
501: DANPAKFIPD VVRPMVDKPS RGIVIPPEAV ESQTRPEHSS VQIGPDASMP LIDTPAPEQR DDWDILKAIV YGGLVESITS LSVVSAAASS GARTLDIFIL
601: GIANLIGGLP IIFHSMAELR SIGDVDEREE QGGHYWLQLG RRSKYRLHVA MAVLSYLLFG LLPPLIYGLS FRGGDVREKK MVAVAAASLG CIALLAMGKA
701: HVARRRSYVK SLLYYLSIGV SASGLSYVAG LLAHFALITH QTPPASSSWA SY
101: ETSSSKGKEL ETQENANSQE TNENSNNSSL ENRSPSNGSH EVCNSGETVT VANGKAGLKV ITIIDKNQNG LANSNGSLHI ANVSMNKTSV HEIEAEKDED
201: VIKGKVNIEE YDLEKILDEQ ETHDLFCPNC NSCITQRVIL RKRKRTVRQT SPDEPPKKTQ IAEPSANTSN QTVPERQGQE SPDIFRCLSC FAFFIPTGCG
301: FNIFRIFGRT EVNQEAQVQE AAASGQMSGS DNCASWLFSC FEPGDGPKKT DAGPEKEPLL PDKQDSNNGS ASSVEGSTAS VHSHGISVQQ QESKRPLPAE
401: SSSQLQPSNT KKEDFGTVSF SGSSSVEAPS SSSASIINPG QTATGFLQTG ETHVVIGQQD IVLQQNVPLP KPGDAAHLDK QKQETPPASH TFPTPGVKIP
501: DANPAKFIPD VVRPMVDKPS RGIVIPPEAV ESQTRPEHSS VQIGPDASMP LIDTPAPEQR DDWDILKAIV YGGLVESITS LSVVSAAASS GARTLDIFIL
601: GIANLIGGLP IIFHSMAELR SIGDVDEREE QGGHYWLQLG RRSKYRLHVA MAVLSYLLFG LLPPLIYGLS FRGGDVREKK MVAVAAASLG CIALLAMGKA
701: HVARRRSYVK SLLYYLSIGV SASGLSYVAG LLAHFALITH QTPPASSSWA SY
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.