Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 61.73 | 25.8 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 79.08 | 25.66 |
| CDX92847 | Canola | plastid | 32.14 | 23.16 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 31.12 | 21.86 |
| CDY14269 | Canola | cytosol | 60.71 | 20.62 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 11.22 | 19.47 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 32.65 | 19.22 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.59 | 18.89 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 10.71 | 18.42 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 10.71 | 17.65 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 16.84 | 16.58 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 29.08 | 15.62 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 33.16 | 14.48 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 33.16 | 13.37 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 27.04 | 13.25 |
| Solyc09g059460.2.1 | Tomato | cytosol | 32.14 | 12.52 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 34.18 | 12.48 |
| KRH66122 | Soybean | cytosol | 28.57 | 12.39 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 35.2 | 11.64 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 35.2 | 11.64 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 35.2 | 11.64 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 34.69 | 11.39 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 33.67 | 11.36 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 34.69 | 11.07 |
| KRH72565 | Soybean | cytosol, nucleus | 29.08 | 10.27 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 32.65 | 10.26 |
| CDX89222 | Canola | nucleus | 38.27 | 9.49 |
| CDY19019 | Canola | nucleus | 37.76 | 9.4 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 30.61 | 9.32 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 30.61 | 9.27 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 30.61 | 9.1 |
| Os06t0103800-01 | Rice | plasma membrane | 33.16 | 8.64 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 20.41 | 8.35 |
| OQU75676 | Sorghum | plasma membrane | 30.61 | 8.09 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 32.14 | 8.07 |
| Zm00001d035875_P002 | Maize | nucleus | 33.67 | 7.9 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 32.65 | 7.48 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 33.16 | 7.46 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 33.67 | 7.45 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 32.65 | 7.33 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 32.65 | 7.28 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 29.59 | 7.06 |
| Solyc03g096800.2.1 | Tomato | nucleus | 32.65 | 5.51 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 2.55 | 1.19 |
Protein Annotations
| EnsemblPlants:CDY31395 | EnsemblPlantsGene:GSBRNA2T00047603001 | GO:A0A078GY09 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:CDY31395 | ProteinID:CDY31395.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE4792 | UniProt:A0A078GY09 | MapMan:24.2.12.2 | : | : | : |
Description
BnaA07g03300DBnaA07g03300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY09]
Coordinates
chrLK032271:-:242886..246404
Molecular Weight (calculated)
21442.1 Da
IEP (calculated)
8.206
GRAVY (calculated)
0.431
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MANASSLHVT EEREEVMFSE KDTNHPVTEV IRIKLLQLKL DILKSIVYGG LIESITSFGV VSSAAASGTS TQLVSVDPYE ELLGKRNKVI LHCFVVFISF
101: IFFGVIPPLF YGFSFKITDK GRYQEAAIFV AASLVCVISL SFAKAYAFGM DKLKTVAAYT GIAIAGSALS FVASQHARDV FAKYDFHKLA SDYLKG
101: IFFGVIPPLF YGFSFKITDK GRYQEAAIFV AASLVCVISL SFAKAYAFGM DKLKTVAAYT GIAIAGSALS FVASQHARDV FAKYDFHKLA SDYLKG
001: MEPTTPYSHE DDVDSTHSSN STASDGTERE ENNNNESQEE TRTSRSPNEA LDEIRRQQTH NLYCPKCKTN ITKSAELVVK NQETDSYKTK AYVLWVPLVI
101: SPFEFPTLHL LLSFLTGLWK KLKTLVPNCL SRLSPNFLPL RYLLVAVLLL LSVIVLWSSD PPLPPPPPPY PSPLPPPPSP SPTPGPDSPL PSPGPDSPLP
201: LPGPPPSPSP TPGPDSPLPS PGPDSPLPLP GPPPSSSPTP GPDSPLPSPG PPPSPSPTPG PDSPLPSPGP DSPLPSPGPD PPLPSPGPHL YEKNRWLIHF
301: PSIKYLSVFS LLFLAILTLP WASISPIFNN LIAAIKTWSK RVIPQTFIKP QPRLSSTDKA LGIFTCKITI TGDHHLCHLS LTLFLIYLLK MTKTHLGAKK
401: PSRLILSWIT KCHFQMFCGN PMWIRPGNLI AKSKGNVEIY RGSSSKPLTN VEIYRGSSSK PLTKRARHLE EYCVRRSYRV HHKPRCRILR CRFRSFNSIT
501: DKGHYKAAVV LAASLVCVIS LSFAKAYAFR MQKLRTMAEY TGMAFGASAF SFIASRIVSD IFEKFGFHEL AAEYRKD
101: SPFEFPTLHL LLSFLTGLWK KLKTLVPNCL SRLSPNFLPL RYLLVAVLLL LSVIVLWSSD PPLPPPPPPY PSPLPPPPSP SPTPGPDSPL PSPGPDSPLP
201: LPGPPPSPSP TPGPDSPLPS PGPDSPLPLP GPPPSSSPTP GPDSPLPSPG PPPSPSPTPG PDSPLPSPGP DSPLPSPGPD PPLPSPGPHL YEKNRWLIHF
301: PSIKYLSVFS LLFLAILTLP WASISPIFNN LIAAIKTWSK RVIPQTFIKP QPRLSSTDKA LGIFTCKITI TGDHHLCHLS LTLFLIYLLK MTKTHLGAKK
401: PSRLILSWIT KCHFQMFCGN PMWIRPGNLI AKSKGNVEIY RGSSSKPLTN VEIYRGSSSK PLTKRARHLE EYCVRRSYRV HHKPRCRILR CRFRSFNSIT
501: DKGHYKAAVV LAASLVCVIS LSFAKAYAFR MQKLRTMAEY TGMAFGASAF SFIASRIVSD IFEKFGFHEL AAEYRKD
Arabidopsis Description
Glycine-rich protein family [Source:UniProtKB/TrEMBL;Acc:Q9STP1]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.