Factsheet for VIT_00s0245g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0245g00030.t01	Wine grape	plasma membrane	36.99	67.84
VIT_00s0267g00030.t01	Wine grape	cytosol	70.41	64.25
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	29.32	38.35
Bra019020.1-P	Field mustard	plasma membrane, plastid	25.75	34.31
TraesCS7B01G200500.1	Wheat	extracellular	10.68	34.21
CDX92847	Canola	plastid	25.48	34.19
TraesCS6B01G375800.1	Wheat	extracellular	10.14	32.74
CDY31395	Canola	plasma membrane	15.62	29.08
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	24.38	28.99
GSMUA_Achr1P20170_001	Banana	nucleus	31.51	25.61
KRH66122	Soybean	cytosol	30.96	25.0
Solyc09g059460.2.1	Tomato	cytosol	30.41	22.07
TraesCS4A01G141900.1	Wheat	extracellular	7.12	21.85
CDX97398	Canola	mitochondrion, plasma membrane, plastid	24.11	18.76
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	29.32	18.42
CDX80427	Canola	cytosol, nucleus, plasma membrane	24.11	18.11
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	24.38	17.15
CDX92846	Canola	cytosol, nucleus, plasma membrane	28.77	17.1
CDX88089	Canola	cytosol, nucleus, plasma membrane	24.93	16.95
CDY29865	Canola	cytosol, nucleus, plasma membrane	28.49	16.67
AT4G27860.3	Thale cress	nucleus	27.95	16.43
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.49	16.33
AT5G24290.1	Thale cress	cytosol	24.38	16.18
CDY19020	Canola	cytosol, nucleus, plasma membrane	26.03	16.02
CDY31394	Canola	cytosol, nucleus, plasma membrane	26.03	16.02
CDY67233	Canola	cytosol, nucleus, plasma membrane	26.03	16.02
CDX89223	Canola	cytosol, nucleus, plasma membrane	26.03	15.91
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	25.48	15.66
Os06t0103800-01	Rice	plasma membrane	30.41	14.76
OQU75676	Sorghum	plasma membrane	29.32	14.42
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	23.56	14.36
AT4G27870.2	Thale cress	nucleus	30.41	14.21
CDY14269	Canola	cytosol	22.47	14.21
CDX89222	Canola	nucleus	30.14	13.92
CDX89224	Canola	cytosol, nucleus, plasma membrane	23.01	13.91
Bra026302.1-P	Field mustard	nucleus	29.86	13.83
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	24.38	13.82
CDY19019	Canola	nucleus	29.59	13.72
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	24.11	13.6
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	24.11	13.35
TraesCS4A01G457600.2	Wheat	nucleus	27.95	13.06
Zm00001d035875_P002	Maize	nucleus	27.95	12.22
TraesCS4A01G457700.2	Wheat	nucleus	28.22	12.03
TraesCS7D01G027900.2	Wheat	nucleus	27.95	11.71
TraesCS7D01G028000.1	Wheat	nucleus	27.4	11.45
Bra010393.1-P	Field mustard	nucleus	21.92	11.33
TraesCS7A01G031400.2	Wheat	nucleus	27.12	11.26
HORVU7Hr1G003870.3	Barley	nucleus	26.85	11.06
CDY19021	Canola	cytosol, nucleus, plasma membrane	13.15	10.02
HORVU7Hr1G003880.2	Barley	nucleus	4.66	4.06

Protein Annotations

MapMan:24.2.12.2	ProteinID:CCB62766	ProteinID:CCB62766.1	UniProt:F6I748	EMBL:FN596765	GO:GO:0003674
GO:GO:0005215	GO:GO:0005381	GO:GO:0005384	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987
GO:GO:0010168	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0034755
GO:GO:0071281	GO:GO:0071421	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	TMHMM:TMhelix	UniParc:UPI0002108ED7
ArrayExpress:VIT_00s0245g00010	EnsemblPlantsGene:VIT_00s0245g00010	EnsemblPlants:VIT_00s0245g00010.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:16878273..16886288

Molecular Weight (calculated)

38818.9 Da

IEP (calculated)

7.500

GRAVY (calculated)

0.081

Length

365 amino acids

Sequence
(BLAST)

001: MVAGGSGSSD AAGIGHITID LIKKTDGDTD FKLGRFLEEP DSHKFRCPNC NACIENINVV HGGENPVGPQ GPITTSPVDP PTTNPVDPPG PITTNPDPRW
101: PIICASCSSF LVFIGDKLTA MCNPQRQPQP EPEPGVPAKK WDILKSIVYG GLLESIASLT IVTSAAGADA TALKILALGL ANVIGGLFVI GHNLMELRNE
201: SNDQSGGSRT ANEETGRYHR ELGLKENFIR HATVAVLSFL LFGLVAPVTY SFSFLKSGNK DLKLVAVAAA SLVCISVLAI GKAYTQKASG FFGYMKTVSS
301: FVIPGFMASG VSYVVGDLIK KLLEKLVLRN TFNGASPKHH LLACHNKYLP TMTLLESTIE KNLDA

Best Arabidopsis Sequence Match ( AT4G27870.1 )
(BLAST)

001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y

Arabidopsis Description

Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.