Factsheet for Bra019020.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
plasma membrane 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92847	Canola	plastid	91.61	92.28
TraesCS7B01G200500.1	Wheat	extracellular	15.69	37.72
VIT_00s0245g00030.t01	Wine grape	plasma membrane	27.01	37.19
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	35.77	35.13
TraesCS6B01G375800.1	Wheat	extracellular	13.14	31.86
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.17	30.61
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	33.21	29.64
TraesCS4A01G141900.1	Wheat	extracellular	12.77	29.41
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	35.04	28.83
VIT_00s0245g00010.t01	Wine grape	cytosol	34.31	25.75
VIT_00s0267g00030.t01	Wine grape	cytosol	36.5	25.0
GSMUA_Achr1P20170_001	Banana	nucleus	38.32	23.39
AT4G27870.2	Thale cress	nucleus	62.41	21.89
Bra026302.1-P	Field mustard	nucleus	62.77	21.83
KRH66122	Soybean	cytosol	35.04	21.24
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.77	18.88
Solyc09g059460.2.1	Tomato	cytosol	33.58	18.29
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	36.86	17.0
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	33.94	16.01
KRH72565	Soybean	cytosol, nucleus	31.39	15.5
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	32.85	13.98
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	32.85	13.91
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	32.12	13.35
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.83	13.19
Os06t0103800-01	Rice	plasma membrane	35.4	12.9
TraesCS4A01G457600.2	Wheat	nucleus	35.04	12.29
OQU75676	Sorghum	plasma membrane	32.85	12.13
Bra010393.1-P	Field mustard	nucleus	30.29	11.76
Zm00001d035875_P002	Maize	nucleus	34.31	11.26
TraesCS4A01G457700.2	Wheat	nucleus	35.04	11.21
TraesCS7D01G027900.2	Wheat	nucleus	35.04	11.02
TraesCS7D01G028000.1	Wheat	nucleus	35.04	11.0
HORVU7Hr1G003870.3	Barley	nucleus	35.4	10.95
TraesCS7A01G031400.2	Wheat	nucleus	35.04	10.92
KRH16940	Soybean	cytosol, nucleus, plasma membrane	32.12	10.72
Solyc03g096800.2.1	Tomato	nucleus	36.13	8.52
HORVU7Hr1G003880.2	Barley	nucleus	2.55	1.67

Protein Annotations

EnsemblPlants:Bra019020.1	EnsemblPlants:Bra019020.1-P	EnsemblPlantsGene:Bra019020	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540BA3	UniProt:M4DR77
MapMan:24.2.12.2	:	:	:	:	:

Description

AT4G27870 (E=5e-084) | integral membrane family protein

Coordinates

chrA03:+:26721843..26723040

Molecular Weight (calculated)

29714.4 Da

IEP (calculated)

10.318

GRAVY (calculated)

0.071

Length

274 amino acids

Sequence
(BLAST)

001: MRSSLPVSTQ QKMANDDRKK PPKKKGRLTP MRSSIPISNP VTLAEPLLTP VVEGRKVEIL KSIVYGGLAE AITSLGVISS AAGSGASTLN ILVLGLANLF
101: GGLVLITHSL HEIRKEELPI RETTAESQTN GQKETRYKRL LGRRENFMLH ATIAILSFII TGLLPPVVYY FSFSKTHNKD YKVASVFGAS LICIALLALA
201: KAHVRNPRSS YLKSVMYYAI TAVSVSGITY VVGNVVNQLI EKYGWSDGSE TPAGEMMLSL MGRKAGGFGY SSSY

Best Arabidopsis Sequence Match ( AT4G27870.1 )
(BLAST)

001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y

Arabidopsis Description

Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.