CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0245g00030.t01	Wine grape	plasma membrane	19.25	43.72
TraesCS6B01G375800.1	Wheat	extracellular	9.29	37.17
CDX92847	Canola	plastid	21.9	36.4
TraesCS7B01G200500.1	Wheat	extracellular	8.85	35.09
Bra019020.1-P	Field mustard	plasma membrane, plastid	21.24	35.04
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	21.46	34.77
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	22.12	32.57
VIT_00s0267g00030.t01	Wine grape	cytosol	28.76	32.5
VIT_00s0245g00010.t01	Wine grape	cytosol	25.0	30.96
TraesCS4A01G141900.1	Wheat	extracellular	7.74	29.41
CDY31395	Canola	plasma membrane	12.39	28.57
GSMUA_Achr1P20170_001	Banana	nucleus	26.99	27.17
Solyc09g059460.2.1	Tomato	cytosol	27.88	25.05
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	29.2	22.72
KRH72565	Soybean	cytosol, nucleus	25.44	20.72
CDX80427	Canola	cytosol, nucleus, plasma membrane	21.24	19.75
CDX92846	Canola	cytosol, nucleus, plasma membrane	25.66	18.89
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.46	18.69
AT5G24290.1	Thale cress	cytosol	22.57	18.55
CDX88089	Canola	cytosol, nucleus, plasma membrane	21.68	18.25
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	25.44	18.05
CDY29865	Canola	cytosol, nucleus, plasma membrane	24.78	17.95
CDX97398	Canola	mitochondrion, plasma membrane, plastid	18.36	17.7
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.9	16.67
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	23.67	16.54
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	23.45	16.46
CDY19020	Canola	cytosol, nucleus, plasma membrane	21.46	16.36
OQU75676	Sorghum	plasma membrane	26.77	16.31
CDY31394	Canola	cytosol, nucleus, plasma membrane	21.02	16.02
CDY67233	Canola	cytosol, nucleus, plasma membrane	21.02	16.02
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	23.23	15.93
CDX89223	Canola	cytosol, nucleus, plasma membrane	21.02	15.91
Os06t0103800-01	Rice	plasma membrane	26.33	15.82
TraesCS4A01G457600.2	Wheat	nucleus	27.21	15.75
AT4G27860.3	Thale cress	nucleus	21.46	15.62
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	20.58	15.53
CDY14269	Canola	cytosol	19.69	15.42
CDX89224	Canola	cytosol, nucleus, plasma membrane	20.35	15.23
HORVU7Hr1G003870.3	Barley	nucleus	28.98	14.79
AT4G27870.2	Thale cress	nucleus	25.44	14.72
TraesCS4A01G457700.2	Wheat	nucleus	27.88	14.72
KRH16940	Soybean	cytosol, nucleus, plasma membrane	26.55	14.62
TraesCS7D01G028000.1	Wheat	nucleus	27.88	14.43
TraesCS7D01G027900.2	Wheat	nucleus	27.65	14.35
CDX89222	Canola	nucleus	24.78	14.18
TraesCS7A01G031400.2	Wheat	nucleus	27.43	14.11
CDY19019	Canola	nucleus	24.56	14.1
Bra026302.1-P	Field mustard	nucleus	24.11	13.83
Zm00001d035875_P002	Maize	nucleus	25.0	13.53
Bra010393.1-P	Field mustard	nucleus	20.13	12.89
CDY19021	Canola	cytosol, nucleus, plasma membrane	12.17	11.48
KRH64258	Soybean	nucleus	9.73	7.89
HORVU7Hr1G003880.2	Barley	nucleus	7.08	7.64
KRH72568	Soybean	nucleus	4.65	6.4

Protein Annotations

EntrezGene:100789148	MapMan:24.2.12.2	EMBL:ACUP02001898	EnsemblPlantsGene:GLYMA_03G084200	GO:GO:0003674	GO:GO:0005215
GO:GO:0005381	GO:GO:0005384	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987	GO:GO:0010168
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0034755	GO:GO:0071281
GO:GO:0071421	UniProt:K7KDT9	EnsemblPlants:KRH66122	ProteinID:KRH66122	ProteinID:KRH66122.1	PANTHER:PTHR31851
PANTHER:PTHR31851:SF16	TMHMM:TMhelix	UniParc:UPI000296BC83	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:23698481..23706813

Molecular Weight (calculated)

49651.0 Da

IEP (calculated)

5.467

GRAVY (calculated)

-0.034

Length

452 amino acids

Sequence
(BLAST)

001: MDAETLTLQK EVVFNQTSKQ VMASSDDDAK VPFVEPVCKT MVIEQGSVGN GQHHDEVKEE NSGPARLYLN PSNSLVYMKN GPAIGIAMSP TEEVREVYLK
101: NMFMMPPNHG FYCPNCHIDI NKVLFCTTRQ QDEFEIKSPG MLLKGPPILP TFTQPPVTTE PTVTTPTLIE PEQDNECLVR CSTCFSLLIQ KGKEFFTGLV
201: SRAPQELESG QGDQHVVPIP DSSPIMPQGP PFTITRPEST KGWEILKSIV YGGLAELLAS LSVVTSAASV DATTLSIVAL GVANLIGGLS VLGHNLRDLK
301: ASQPRQGSET QAQEDKYYEL LGKRENFYLH AFFAILSFLI FGLVPPIAYG FSFRESNDKD LKLAAVAVAS LICITLLGMA KAHIQRSNTF MTYFKTVTFY
401: VTSGVLASLL TYEAGALMKK LVEQLGWFET KSNFGLTLPE MMSIKKSGWG SY

Best Arabidopsis Sequence Match ( AT4G27860.1 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTDNKRNRLT PIYPSSLEKP SKQTVNKETQ NHDKEAADPD QDVDKETENQ KSHLTPIYPS PLEQPSKQII NKETQTEPML PPNAQSEIPN
401: SVEPRKGGNK VEILKSIVYG GLTESITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLT VHSLQELINE KPRKQTNTDD SPEEGEGEED RYEEVLGRRE
501: YSRIHRVIAI SSFVIFGLIP PLVYGFSFRK KMEKRQEYKV LAVYAVSLLC IVLLSIAKAY VSKKRDYVKT LFRYTTTATT ASGFSQFVGY LVSQWLEKSG
601: FYDDSPETQR V

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.