CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67233	Canola	cytosol, nucleus, plasma membrane	95.98	96.63
CDY31394	Canola	cytosol, nucleus, plasma membrane	95.98	96.63
CDY19020	Canola	cytosol, nucleus, plasma membrane	89.28	89.88
AT4G27860.3	Thale cress	nucleus	52.09	50.08
CDX92847	Canola	plastid	15.91	34.93
CDY31395	Canola	plasma membrane	11.39	34.69
TraesCS7B01G200500.1	Wheat	extracellular	6.53	34.21
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	15.75	33.69
TraesCS6B01G375800.1	Wheat	extracellular	5.86	30.97
VIT_00s0245g00030.t01	Wine grape	plasma membrane	10.22	30.65
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	16.08	28.83
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	14.41	28.01
VIT_00s0267g00030.t01	Wine grape	cytosol	18.26	27.25
GSMUA_Achr1P20170_001	Banana	nucleus	19.6	26.06
VIT_00s0245g00010.t01	Wine grape	cytosol	15.91	26.03
CDX97398	Canola	mitochondrion, plasma membrane, plastid	19.93	25.37
TraesCS4A01G141900.1	Wheat	extracellular	4.86	24.37
CDX80427	Canola	cytosol, nucleus, plasma membrane	18.09	22.22
CDY14269	Canola	cytosol	20.44	21.14
KRH66122	Soybean	cytosol	15.91	21.02
Solyc09g059460.2.1	Tomato	cytosol	17.59	20.87
CDY29865	Canola	cytosol, nucleus, plasma membrane	21.61	20.67
CDX89224	Canola	cytosol, nucleus, plasma membrane	20.6	20.36
CDX88089	Canola	cytosol, nucleus, plasma membrane	18.26	20.3
CDX92846	Canola	cytosol, nucleus, plasma membrane	20.1	19.54
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	18.59	19.11
CDX89222	Canola	nucleus	24.29	18.35
CDY19019	Canola	nucleus	23.95	18.17
Os06t0103800-01	Rice	plasma membrane	21.44	17.02
CDY19021	Canola	cytosol, nucleus, plasma membrane	12.9	16.08
KRH72565	Soybean	cytosol, nucleus	14.41	15.5
OQU75676	Sorghum	plasma membrane	19.1	15.36
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	16.42	15.22
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	16.75	15.17
TraesCS4A01G457600.2	Wheat	nucleus	19.43	14.85
Zm00001d035875_P002	Maize	nucleus	20.77	14.85
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	16.08	14.84
TraesCS4A01G457700.2	Wheat	nucleus	20.27	14.14
TraesCS7D01G027900.2	Wheat	nucleus	20.44	14.01
TraesCS7A01G031400.2	Wheat	nucleus	20.44	13.88
KRH16940	Soybean	cytosol, nucleus, plasma membrane	18.43	13.4
TraesCS7D01G028000.1	Wheat	nucleus	19.26	13.17
HORVU7Hr1G003870.3	Barley	nucleus	19.1	12.87
Solyc03g096800.2.1	Tomato	nucleus	22.11	11.36
HORVU7Hr1G003880.2	Barley	nucleus	4.86	6.92

Protein Annotations

EnsemblPlants:CDX89223	EnsemblPlantsGene:GSBRNA2T00149410001	GO:A0A078DPT9	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	ProteinID:CDX89223
ProteinID:CDX89223.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDD2C0	MapMan:24.2.12.2	:

Description

BnaA01g16700D

Coordinates

chrLK031858:-:237238..239617

Molecular Weight (calculated)

66665.3 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.467

Length

597 amino acids

Sequence
(BLAST)

001: MESTATNQTP SPSSTVDDDN GDGVYTNEFT KLPPDSPHSS EDEDSVDFSH EQDSSLVPIG FELHEAIDTG SASRSVRGKD SQTERDFLDS DVEIVIKNQH
101: EYYFYCPCCG EDITKTVKLV KKSDIQLTKD GKTKNEAADT KNDTRSEDKK TKISSWFPVY LQKLFLSVYG HIKDKDSGKI EVDSKSTIND LGTDSEEPSI
201: DVKTEKDRPS FPKWYLDVFA WLFLCIIIAL SFLFTSPQQS SPFIAPHLEL ELPSISPLPL PSVSILWLLP AFSVLSLVIM AIRSGYIPIH HKEKGDKEVD
301: SKSTDTTSEE QIKKTKIEDD QAADSCQDSD KKTDNQKVHP VLVDPPPPQE QPSMQIANKE TPPKTQAEPG VQPDTQPEIP KSVEPGKGGN KIEILKSIVY
401: GGLTQSITSL CTVTSAAASG ASTLNVLALG VANLSSGLLL IVHSLQELIN EKPKTRTNTD DQKESDADVE EEEEEDRYVE ALGRREKWWF HRLIAISSFV
501: VFGLIPPLVY GFSFRRRVEK RQEYKTLAVY AVSLLCIVLL SVAKAYVSKR REYVKTLFRY TSMATTASGF STFMGYFVNQ WLEKSGFYDE STETPRV

Best Arabidopsis Sequence Match ( AT4G27860.2 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.