Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89222 | Canola | nucleus | 87.17 | 86.84 |
| CDX92847 | Canola | plastid | 21.73 | 62.87 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 37.23 | 47.72 |
| AT4G27870.2 | Thale cress | nucleus | 46.25 | 46.61 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 36.72 | 46.31 |
| CDY31395 | Canola | plasma membrane | 9.4 | 37.76 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 9.28 | 36.68 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 12.83 | 36.2 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 5.21 | 35.96 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 14.23 | 33.63 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 18.81 | 32.96 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 4.7 | 32.74 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.33 | 31.6 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 15.12 | 29.75 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 13.72 | 29.59 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 4.32 | 28.57 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 17.53 | 28.4 |
| Solyc09g059460.2.1 | Tomato | cytosol | 17.66 | 27.63 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 18.55 | 27.19 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 15.5 | 26.01 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 18.55 | 24.62 |
| KRH66122 | Soybean | cytosol | 14.1 | 24.56 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 18.04 | 24.44 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 18.3 | 24.28 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 18.3 | 24.28 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 18.17 | 23.95 |
| Os06t0103800-01 | Rice | plasma membrane | 22.87 | 23.94 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 19.57 | 23.37 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 23.13 | 23.3 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 25.79 | 23.25 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 18.68 | 22.72 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 18.17 | 22.2 |
| CDY14269 | Canola | cytosol | 16.01 | 21.84 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 24.02 | 21.5 |
| Zm00001d035875_P002 | Maize | nucleus | 22.62 | 21.32 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 22.11 | 21.19 |
| OQU75676 | Sorghum | plasma membrane | 19.95 | 21.16 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 16.14 | 21.03 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 23.25 | 21.01 |
| KRH72565 | Soybean | cytosol, nucleus | 14.74 | 20.9 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 22.49 | 20.68 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 23.13 | 20.54 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 10.04 | 18.85 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 10.67 | 17.54 |
| Solyc03g096800.2.1 | Tomato | nucleus | 22.11 | 14.97 |
Protein Annotations
| EnsemblPlants:CDY19019 | EnsemblPlantsGene:GSBRNA2T00006268001 | GO:A0A078G0N9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:CDY19019 | ProteinID:CDY19019.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEB609 | UniProt:A0A078G0N9 | MapMan:24.2.12.2 | : | : | : |
Description
BnaC01g20490DBnaC01g20490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0N9]
Coordinates
chrLK032091:-:392069..396111
Molecular Weight (calculated)
85320.6 Da
IEP (calculated)
4.498
GRAVY (calculated)
-0.443
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAAEVNEP TTAGTEKLHH PVNLEEEEEE QVVELERKTS PFLPHGKRPD SADGSTITTN NSSSSSFSEG IPDPRNGEGE HIGIENLEVP ESPVVGFHEE
101: HHDGNVFFDG EEGIWKCRHC DWTYREESLL CFETKGSKSH ESNTADNLSA EKKERVSENG STSEDNKGPS REIEEVQDTD LPEEVVVQRT GDVIEEEEVD
201: IDDVEDYNVE KVLDNQETHD LFCPNCHSCI TKRVVLKKRK RKISHAVPED PKRVRGPDRI DPILRSEDNE PSPVGGDSST PESFFYKCLS CFSIFIPKGV
301: DSKPVVPSES VERLNTQPKP QEEATGHSNW FGSMFGSKKK EPPVQQGGAM PSIPEASLPR DNPSVLGEET AGSTANIPSK APALVQEGPV PSIQDVSEIS
401: VSLDNEPVDD TPLIQVANSN DTGKGVNSGA TVENGQQFLV PSADEEQTQQ KIDRDGASSA ADENHSPDKG RLSPIQPSRD MNISNIVTSG PDGVRVETIF
501: HTEGVSHLFE GTEPRKPDFG LAKVTGVMES GDGAPIRGID IPPLPLSSLE EGTLTEPLVG PAVAGPVVEG RKVEILKSIV YGGLIEAITS LGVISSAAGS
601: GASTLNILVL GLANLFGGLI LIIHNLQELR EEEPITTEDN QTNVQEEGRY KRLLGRRENF TLHVTVAIIS FIIMGLLPPI VYYFSFSKTH NRDYKVASVF
701: GASLLCIVLL ALAKAHVRSP RGSHLKSVLK YAMIAVSVSG ISYVVGNFVD QLLEKYGWSD GSETPAAEMM LSLLGRKAGS FGYSSSY
101: HHDGNVFFDG EEGIWKCRHC DWTYREESLL CFETKGSKSH ESNTADNLSA EKKERVSENG STSEDNKGPS REIEEVQDTD LPEEVVVQRT GDVIEEEEVD
201: IDDVEDYNVE KVLDNQETHD LFCPNCHSCI TKRVVLKKRK RKISHAVPED PKRVRGPDRI DPILRSEDNE PSPVGGDSST PESFFYKCLS CFSIFIPKGV
301: DSKPVVPSES VERLNTQPKP QEEATGHSNW FGSMFGSKKK EPPVQQGGAM PSIPEASLPR DNPSVLGEET AGSTANIPSK APALVQEGPV PSIQDVSEIS
401: VSLDNEPVDD TPLIQVANSN DTGKGVNSGA TVENGQQFLV PSADEEQTQQ KIDRDGASSA ADENHSPDKG RLSPIQPSRD MNISNIVTSG PDGVRVETIF
501: HTEGVSHLFE GTEPRKPDFG LAKVTGVMES GDGAPIRGID IPPLPLSSLE EGTLTEPLVG PAVAGPVVEG RKVEILKSIV YGGLIEAITS LGVISSAAGS
601: GASTLNILVL GLANLFGGLI LIIHNLQELR EEEPITTEDN QTNVQEEGRY KRLLGRRENF TLHVTVAIIS FIIMGLLPPI VYYFSFSKTH NRDYKVASVF
701: GASLLCIVLL ALAKAHVRSP RGSHLKSVLK YAMIAVSVSG ISYVVGNFVD QLLEKYGWSD GSETPAAEMM LSLLGRKAGS FGYSSSY
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.