Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92847 | Canola | plastid | 29.64 | 66.91 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 59.61 | 58.65 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 7.17 | 38.6 |
| CDX89222 | Canola | nucleus | 49.19 | 38.23 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 12.21 | 37.69 |
| CDY19019 | Canola | nucleus | 47.72 | 37.23 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 16.29 | 35.84 |
| CDY31395 | Canola | plasma membrane | 11.07 | 34.69 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 6.35 | 34.51 |
| AT4G27870.2 | Thale cress | nucleus | 43.32 | 34.06 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.64 | 31.27 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 16.61 | 30.63 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 5.7 | 29.41 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 17.1 | 28.77 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 20.52 | 28.06 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 17.59 | 27.0 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 21.34 | 26.95 |
| KRH66122 | Soybean | cytosol | 18.89 | 25.66 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 22.31 | 25.51 |
| Solyc09g059460.2.1 | Tomato | cytosol | 20.85 | 25.45 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 21.01 | 22.2 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 16.29 | 21.32 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 19.87 | 20.57 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 19.54 | 20.24 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 19.54 | 20.24 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 19.54 | 20.1 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 20.52 | 19.12 |
| Os06t0103800-01 | Rice | plasma membrane | 23.13 | 18.88 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 18.4 | 18.71 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 19.71 | 18.7 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 19.54 | 18.63 |
| KRH72565 | Soybean | cytosol, nucleus | 16.45 | 18.2 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 23.13 | 18.18 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 25.57 | 17.98 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 23.94 | 17.91 |
| Zm00001d035875_P002 | Maize | nucleus | 24.1 | 17.72 |
| OQU75676 | Sorghum | plasma membrane | 21.34 | 17.66 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 24.43 | 17.52 |
| CDY14269 | Canola | cytosol | 16.12 | 17.16 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 13.36 | 17.12 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 23.78 | 16.61 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 22.96 | 16.19 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 22.64 | 15.69 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 9.93 | 14.56 |
| Solyc03g096800.2.1 | Tomato | nucleus | 24.92 | 13.17 |
Protein Annotations
| EnsemblPlants:CDX92846 | EnsemblPlantsGene:GSBRNA2T00154682001 | GO:A0A078DU94 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:CDX92846 |
| ProteinID:CDX92846.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE692E | MapMan:24.2.12.2 | : |
Description
BnaC07g41040D
Coordinates
chrLK031873:+:1105509..1108301
Molecular Weight (calculated)
68189.1 Da
IEP (calculated)
4.779
GRAVY (calculated)
-0.446
Length
614 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAEVMELT TGTERHHQDV AMEEEDDDQV VGLERKTSSL AHEKRPDSAD SSTITTTNTS SSSSFSGDGE RVTIESLEVH ESEEKETGFH GEHDDLNNGN
101: VYLDVDQGIW KCRHCDWTYR EESLLCFETK GSESSDAESD DHESQTVDHL NGKKKVTEFE KGSSSEDKKG SREIDEVQDG DIAEEVEVIE EEEVDIEDVK
201: DYKAKELLEN HKTPDLLCPK CKTCITKVVV LKKRVVLKKK FAHKKNRQNN PNVPERPRGT GDSPRLEVNP PSRGDGDKAI TEPNQSFFYK CLSCFSIFEH
301: TGVEGGLSIQ AKPPQEAPVD FNCLRGVFGF NKEKEPDVHQ VVNYLAVILI HTLLTLRFWL GVVDTEPRHE IYIPPLSDSP IDEDTLGERL LPQERRKPEI
401: LKSIVYGGLT EAITSLGVIS SAAGSGASTL NILVLGLANL FSGLILIIHN LQELRKEEPI RETTQVSQTN GEEESQYKRL LGRRENFMLH ATVAILSFII
501: TGLLPPVVYY FSFRETQDKD YKVASVFGAS LICISFLALA KAHVRSPGSG YLKSVLYYAA NAVSVSGITY VVGNVVNQVI EKYGWSDGSE TPGGEMMLSL
601: MGRKAGGFGY SSSY
101: VYLDVDQGIW KCRHCDWTYR EESLLCFETK GSESSDAESD DHESQTVDHL NGKKKVTEFE KGSSSEDKKG SREIDEVQDG DIAEEVEVIE EEEVDIEDVK
201: DYKAKELLEN HKTPDLLCPK CKTCITKVVV LKKRVVLKKK FAHKKNRQNN PNVPERPRGT GDSPRLEVNP PSRGDGDKAI TEPNQSFFYK CLSCFSIFEH
301: TGVEGGLSIQ AKPPQEAPVD FNCLRGVFGF NKEKEPDVHQ VVNYLAVILI HTLLTLRFWL GVVDTEPRHE IYIPPLSDSP IDEDTLGERL LPQERRKPEI
401: LKSIVYGGLT EAITSLGVIS SAAGSGASTL NILVLGLANL FSGLILIIHN LQELRKEEPI RETTQVSQTN GEEESQYKRL LGRRENFMLH ATVAILSFII
501: TGLLPPVVYY FSFRETQDKD YKVASVFGAS LICISFLALA KAHVRSPGSG YLKSVLYYAA NAVSVSGITY VVGNVVNQVI EKYGWSDGSE TPGGEMMLSL
601: MGRKAGGFGY SSSY
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.