CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026302.1-P	Field mustard	nucleus	88.35	88.58
CDY19019	Canola	nucleus	86.84	87.17
CDX92847	Canola	plastid	21.9	63.6
CDX92846	Canola	cytosol, nucleus, plasma membrane	38.23	49.19
CDY29865	Canola	cytosol, nucleus, plasma membrane	36.84	46.63
AT4G27870.2	Thale cress	nucleus	45.7	46.22
CDY31395	Canola	plasma membrane	9.49	38.27
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	13.16	37.28
TraesCS7B01G200500.1	Wheat	extracellular	5.32	36.84
VIT_00s0245g00030.t01	Wine grape	plasma membrane	9.11	36.18
GSMUA_Achr1P20170_001	Banana	nucleus	18.86	33.18
TraesCS6B01G375800.1	Wheat	extracellular	4.68	32.74
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	13.54	32.13
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	12.41	31.92
VIT_00s0245g00010.t01	Wine grape	cytosol	13.92	30.14
VIT_00s0267g00030.t01	Wine grape	cytosol	15.19	30.0
TraesCS4A01G141900.1	Wheat	extracellular	4.3	28.57
CDX80427	Canola	cytosol, nucleus, plasma membrane	17.22	27.98
Solyc09g059460.2.1	Tomato	cytosol	17.09	26.84
CDX88089	Canola	cytosol, nucleus, plasma membrane	18.1	26.63
CDY19020	Canola	cytosol, nucleus, plasma membrane	19.24	25.63
CDX97398	Canola	mitochondrion, plasma membrane, plastid	15.06	25.37
CDY67233	Canola	cytosol, nucleus, plasma membrane	18.61	24.79
CDY31394	Canola	cytosol, nucleus, plasma membrane	18.61	24.79
KRH66122	Soybean	cytosol	14.18	24.78
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	17.97	24.44
CDX89223	Canola	cytosol, nucleus, plasma membrane	18.35	24.29
Os06t0103800-01	Rice	plasma membrane	22.91	24.07
TraesCS4A01G457600.2	Wheat	nucleus	23.16	23.43
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	19.49	23.37
TraesCS7D01G028000.1	Wheat	nucleus	25.82	23.37
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	18.73	22.87
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	18.23	22.36
CDY14269	Canola	cytosol	16.08	22.01
TraesCS7A01G031400.2	Wheat	nucleus	24.3	21.84
TraesCS4A01G457700.2	Wheat	nucleus	23.29	21.5
Zm00001d035875_P002	Maize	nucleus	22.41	21.2
TraesCS7D01G027900.2	Wheat	nucleus	23.29	21.13
KRH72565	Soybean	cytosol, nucleus	14.81	21.08
KRH16940	Soybean	cytosol, nucleus, plasma membrane	21.9	21.07
CDX89224	Canola	cytosol, nucleus, plasma membrane	16.08	21.03
OQU75676	Sorghum	plasma membrane	19.75	21.02
HORVU7Hr1G003870.3	Barley	nucleus	23.29	20.77
HORVU7Hr1G003880.2	Barley	nucleus	10.63	20.05
CDY19021	Canola	cytosol, nucleus, plasma membrane	11.14	18.37
Solyc03g096800.2.1	Tomato	nucleus	22.28	15.15

Protein Annotations

EnsemblPlants:CDX89222	EnsemblPlantsGene:GSBRNA2T00149409001	GO:A0A078DJY1	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	ProteinID:CDX89222
ProteinID:CDX89222.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EF0ED4	MapMan:24.2.12.2	:

Description

BnaA01g16710D

Coordinates

chrLK031858:-:229334..233360

Molecular Weight (calculated)

85650.9 Da

IEP (calculated)

4.515

GRAVY (calculated)

-0.442

Length

790 amino acids

Sequence
(BLAST)

001: MGSAAEVNEP TTAGTEKLHH PVNLEEEEEE QVVELERKTS PFLPHGKRPD SADGSTITTN NSSSSSFSEG IPDLRNGEGE HIGIENLEVP ESPVVGFHEE
101: HHDGNVFFDG EEGIWKCRHC DWTYREESLL CFETKGSESA DAHESNTADN LSAEKKERVS ENGSTSEDNK GPSREIEEVQ DIDLPEEVVV QRPGDVIEEE
201: VDIDDVEDYN VEKVLDNQET HDLFCPNCHS CITKRVVLKK RKRKISHAVP EDPKRVRGPH PIDPILRSED NEPSPPGGDD SSTPESFFYK CLSCFSIFIP
301: KGVDSKPVAP SESVERLNTQ PKPQEEATAH SNWFGSMFGS KKKEPPVQQG GAMPSIPEAS LPRDNPSVLG EETAGSTANI PSKAPALVQD GAVPSVQDVS
401: EISVSQDNKP VDDTLLIQVA NSNDTSKGVN SGATVENGKQ FLVPSADEEQ TQQKIDRDDA TSAAEENHSP DKGRLSPIQP SRDMNISNIV TSGPDGVRVE
501: TIFHTEGVSH LFEGTDPRKP DFGLAKVTGV VDSGDGAPIR GIDIPPLPLS SLEEGTLTEP LVRPAVAGPV VEGRKLEILK SIVYGGLIEA ITSLGVISSA
601: AGSGASTLNI LVLGLANLFG GLILIIHNLQ ELREEEPITT EDNQTNVQEE GRYKRLLGRR ENFTLHVTVA IISFIITGLL PPIVYYFSFS KTHNRDYKVA
701: SVFGASLLCI VLLALAKAHV RSPRGSHLKS VLKYAMIAVS VSGISYVVGN FVDQLLEKYG WSDGSETPAA EMMLSLLGRK AGSFGYSSSY

Best Arabidopsis Sequence Match ( AT4G27870.2 )
(BLAST)

001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y

Arabidopsis Description

Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.