Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 93.75 | 91.84 |
| CDX92847 | Canola | plastid | 29.17 | 66.91 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 58.65 | 59.61 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 7.37 | 40.35 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 12.66 | 39.7 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 6.73 | 37.17 |
| CDX89222 | Canola | nucleus | 46.63 | 36.84 |
| CDY19019 | Canola | nucleus | 46.31 | 36.72 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 15.54 | 34.77 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.51 | 33.55 |
| AT4G27870.2 | Thale cress | nucleus | 41.67 | 33.29 |
| CDY31395 | Canola | plasma membrane | 10.26 | 32.65 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 6.09 | 31.93 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 16.99 | 31.83 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 21.47 | 29.84 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 16.67 | 28.49 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 17.63 | 27.5 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 20.83 | 26.75 |
| Solyc09g059460.2.1 | Tomato | cytosol | 20.51 | 25.45 |
| KRH66122 | Soybean | cytosol | 17.95 | 24.78 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 20.35 | 23.65 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 21.96 | 23.58 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 16.67 | 22.17 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 20.67 | 21.75 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 20.67 | 21.75 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 20.67 | 21.61 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 20.35 | 21.42 |
| Os06t0103800-01 | Rice | plasma membrane | 24.36 | 20.21 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 24.2 | 19.33 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 19.55 | 18.94 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 19.39 | 18.7 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 17.95 | 18.54 |
| CDY14269 | Canola | cytosol | 16.99 | 18.37 |
| OQU75676 | Sorghum | plasma membrane | 21.79 | 18.33 |
| Zm00001d035875_P002 | Maize | nucleus | 24.52 | 18.32 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 19.23 | 18.21 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 23.88 | 17.41 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 24.04 | 17.18 |
| KRH72565 | Soybean | cytosol, nucleus | 15.22 | 17.12 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 12.98 | 16.91 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 23.72 | 16.84 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 23.4 | 16.76 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 23.72 | 16.7 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 21.31 | 16.2 |
| Solyc03g096800.2.1 | Tomato | nucleus | 24.68 | 13.25 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 7.53 | 11.22 |
Protein Annotations
| EnsemblPlants:CDY29865 | EnsemblPlantsGene:GSBRNA2T00044310001 | GO:A0A078GTN6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:CDY29865 | ProteinID:CDY29865.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EF3BB2 | UniProt:A0A078GTN6 | MapMan:24.2.12.2 | : | : |
Description
BnaA03g48860DBnaA03g48860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTN6]
Coordinates
chrLK032245:+:195117..197945
Molecular Weight (calculated)
68492.3 Da
IEP (calculated)
4.550
GRAVY (calculated)
-0.448
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAEVMELT TGTEKHHQEV EMEEEEDQVV GLERKTSSLA HEKRPDSADS STITTTNTSS SSSFSGDGER VTIESLEIYE SAEKEIGFHG EHDDVNNGNV
101: YLDVHQGSES SDAESDDHES HTVDHLNGKK KVTEFEKGSS SEENKGSREI DEVQDDDIPE EVEVIEEEEV DIEHVKDYKA KELVENQKTP DLLCPKCKNC
201: ITKVALKKNK QNNPNVPERP AATRPTGTDD NLRSEDNMKS AVSSENPIPG SFFYKCLSCF SIFNIEPIVV GSNPVPPSEV NVGINTRLKP QQEPTGCSNW
301: IVSMIGIKKN EQLEDKAMPS VPEDNRPRDN HTPLVVDTAA PPPVQDDAVT LIQDKVRLSP IQPQHDVNVP KAMSSGPSDS RVDIRQLPVT SLLGETPADP
401: LLPQVVERRK PEILKSVVYG GLTEAITSLG VISSAAGSGA STLNILVLGL ANLFGGLILI IHNLQELREE EPIIETTDDN GEEETRYKRL LGRRENFMLH
501: ATLAILSFII TGLLPPVVYY FSFRETHNKD YKVASVFSAS LICISFLALA KAHVRSPRGS YLKSVLYYAA NAVSVSGITY VVGNVVNQLL EKYGWSDGSE
601: TPAGEMMLSL MGRKAGGFGY SSSY
101: YLDVHQGSES SDAESDDHES HTVDHLNGKK KVTEFEKGSS SEENKGSREI DEVQDDDIPE EVEVIEEEEV DIEHVKDYKA KELVENQKTP DLLCPKCKNC
201: ITKVALKKNK QNNPNVPERP AATRPTGTDD NLRSEDNMKS AVSSENPIPG SFFYKCLSCF SIFNIEPIVV GSNPVPPSEV NVGINTRLKP QQEPTGCSNW
301: IVSMIGIKKN EQLEDKAMPS VPEDNRPRDN HTPLVVDTAA PPPVQDDAVT LIQDKVRLSP IQPQHDVNVP KAMSSGPSDS RVDIRQLPVT SLLGETPADP
401: LLPQVVERRK PEILKSVVYG GLTEAITSLG VISSAAGSGA STLNILVLGL ANLFGGLILI IHNLQELREE EPIIETTDDN GEEETRYKRL LGRRENFMLH
501: ATLAILSFII TGLLPPVVYY FSFRETHNKD YKVASVFSAS LICISFLALA KAHVRSPRGS YLKSVLYYAA NAVSVSGITY VVGNVVNQLL EKYGWSDGSE
601: TPAGEMMLSL MGRKAGGFGY SSSY
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.