CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G200500.1	Wheat	extracellular	7.21	35.09
TraesCS6B01G375800.1	Wheat	extracellular	6.85	33.63
CDX92847	Canola	plastid	16.22	33.09
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	16.22	32.26
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	18.92	31.53
Bra019020.1-P	Field mustard	plasma membrane, plastid	15.5	31.39
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	17.12	30.94
CDY31395	Canola	plasma membrane	10.27	29.08
TraesCS4A01G141900.1	Wheat	extracellular	5.95	27.73
KRH16940	Soybean	cytosol, nucleus, plasma membrane	40.9	27.65
KRH66122	Soybean	cytosol	20.72	25.44
GSMUA_Achr1P20170_001	Banana	nucleus	19.1	23.61
CDX80427	Canola	cytosol, nucleus, plasma membrane	16.94	19.34
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	17.12	18.3
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	21.26	18.24
CDX88089	Canola	cytosol, nucleus, plasma membrane	17.3	17.88
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	20.72	17.86
CDX97398	Canola	mitochondrion, plasma membrane, plastid	14.77	17.48
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	20.36	17.15
CDX92846	Canola	cytosol, nucleus, plasma membrane	18.2	16.45
AT4G27860.3	Thale cress	nucleus	18.2	16.26
AT5G24290.1	Thale cress	cytosol	16.04	16.18
TraesCS4A01G457600.2	Wheat	nucleus	22.52	16.01
OQU75676	Sorghum	plasma membrane	20.36	15.23
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	17.48	15.23
CDY29865	Canola	cytosol, nucleus, plasma membrane	17.12	15.22
Os06t0103800-01	Rice	plasma membrane	20.54	15.16
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.04	14.98
CDX89222	Canola	nucleus	21.08	14.81
CDY19019	Canola	nucleus	20.9	14.74
CDY19020	Canola	cytosol, nucleus, plasma membrane	15.68	14.67
TraesCS7D01G028000.1	Wheat	nucleus	23.06	14.66
AT4G27870.2	Thale cress	nucleus	20.54	14.6
CDX89224	Canola	cytosol, nucleus, plasma membrane	15.86	14.57
CDY14269	Canola	cytosol	15.14	14.56
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.68	14.52
CDY67233	Canola	cytosol, nucleus, plasma membrane	15.5	14.5
CDY31394	Canola	cytosol, nucleus, plasma membrane	15.5	14.5
CDX89223	Canola	cytosol, nucleus, plasma membrane	15.5	14.41
Bra026302.1-P	Field mustard	nucleus	19.82	13.96
TraesCS7D01G027900.2	Wheat	nucleus	21.62	13.78
HORVU7Hr1G003870.3	Barley	nucleus	21.62	13.54
TraesCS7A01G031400.2	Wheat	nucleus	21.26	13.42
Zm00001d035875_P002	Maize	nucleus	20.18	13.41
TraesCS4A01G457700.2	Wheat	nucleus	20.18	13.08
Bra010393.1-P	Field mustard	nucleus	15.68	12.32
CDY19021	Canola	cytosol, nucleus, plasma membrane	9.37	10.86
KRH72568	Soybean	nucleus	5.95	10.06
Solyc03g096800.2.1	Tomato	nucleus	20.72	9.9
KRH64258	Soybean	nucleus	7.57	7.53
HORVU7Hr1G003880.2	Barley	nucleus	3.96	5.25

Protein Annotations

MapMan:24.2.12.2	UniProt:A0A0R0L7M1	EMBL:ACUP02001221	EnsemblPlantsGene:GLYMA_02G2205002	GO:GO:0003674	GO:GO:0005215
GO:GO:0005381	GO:GO:0005384	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987	GO:GO:0010168
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0034755	GO:GO:0071281
GO:GO:0071421	EnsemblPlants:KRH72565	ProteinID:KRH72565	ProteinID:KRH72565.1	ProteinID:KRH72566.1	PANTHER:PTHR31851
PANTHER:PTHR31851:SF16	TMHMM:TMhelix	UniParc:UPI0006ED803A	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:40828469..40832988

Molecular Weight (calculated)

59052.8 Da

IEP (calculated)

4.888

GRAVY (calculated)

-0.201

Length

555 amino acids

Sequence
(BLAST)

001: KCLDMFRFDG ASKSESARNP PIIPASNLQN PSIPQGSNAN WLTSLFTWKK GGKTSDAPLE HSGAGSAEQR NSTLNSNDEP TSLEIGPSKG PLADTSDIKN
101: VKSTSNIKHG HGGMNSLISS TNDLSSIQSG TKGAGDLMNG VQSDVQNSVD FLAEKQLLAG NQIFGKEEKK NASVDIIRTD NAEVMLSAAT TTETIEREPE
201: FLASTTVGSQ VLKESPKDGD KTPEIVKNGY YYSLGQGAQS PLQSSGSAVL ANGVASNKQN SGIDVILPSK PNIILLDNVK KEIEKGIHHP TGNENKGGDV
301: ILDVERGAFE STTSHTADNI PAEDAIITEL QTQVQNGEQP RDEVGEPQGW EILKSIVYGG LVESITSLGI VSSAVSSGAT PLNIIALGFA NIIGGLFILG
401: DNLIDLKKDN SGEDQMQTNA QNRYQESLGR RENFLLHAVV AVLSFLIFGA VPLVIYGLLI NKNYHTEVKL ATVAATSIVC IILLAIGKVY TSKAPKSYIK
501: TVLYYVTLAI SASGVSYIAG NLIKDFLEKL NQPESGFAIT MPISDTSMGS AWMSY

Best Arabidopsis Sequence Match ( AT4G27860.2 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.