Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G200500.1 | Wheat | extracellular | 69.91 | 69.3 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 31.86 | 30.25 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.26 | 24.76 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 34.51 | 19.6 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 36.28 | 14.7 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 42.48 | 14.41 |
| CDX92847 | Canola | plastid | 32.74 | 13.6 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 31.86 | 13.14 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 69.91 | 12.21 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 68.14 | 11.96 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 65.49 | 11.23 |
| CDY31395 | Canola | plasma membrane | 19.47 | 11.22 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 32.74 | 10.14 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 67.26 | 9.73 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 38.05 | 9.58 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 33.63 | 9.5 |
| KRH66122 | Soybean | cytosol | 37.17 | 9.29 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 68.14 | 8.82 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 68.14 | 8.69 |
| Solyc09g059460.2.1 | Tomato | cytosol | 35.4 | 7.95 |
| OQU75676 | Sorghum | plasma membrane | 51.33 | 7.82 |
| Os06t0103800-01 | Rice | plasma membrane | 50.44 | 7.58 |
| Zm00001d035875_P002 | Maize | nucleus | 53.1 | 7.19 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 30.09 | 7.0 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 35.4 | 6.88 |
| KRH72565 | Soybean | cytosol, nucleus | 33.63 | 6.85 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 28.32 | 6.82 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 37.17 | 6.73 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 30.09 | 6.55 |
| AT5G24290.1 | Thale cress | cytosol | 30.97 | 6.36 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 34.51 | 6.35 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 30.09 | 6.33 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 35.4 | 6.28 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 30.97 | 5.9 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 30.97 | 5.9 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 30.97 | 5.9 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 30.97 | 5.89 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 30.97 | 5.86 |
| AT4G27860.3 | Thale cress | nucleus | 30.97 | 5.64 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 29.2 | 5.51 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 29.2 | 5.46 |
| CDY14269 | Canola | cytosol | 26.55 | 5.2 |
| AT4G27870.2 | Thale cress | nucleus | 33.63 | 4.87 |
| CDY19019 | Canola | nucleus | 32.74 | 4.7 |
| CDX89222 | Canola | nucleus | 32.74 | 4.68 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 33.63 | 4.63 |
| Bra026302.1-P | Field mustard | nucleus | 31.86 | 4.57 |
| Bra010393.1-P | Field mustard | nucleus | 26.55 | 4.25 |
| Solyc03g096800.2.1 | Tomato | nucleus | 42.48 | 4.13 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 10.62 | 2.51 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 0.88 | 0.24 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G375800.1 | EnsemblPlantsGene:TraesCS6B01G375800 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.12.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:650659437..650659887
Molecular Weight (calculated)
12488.5 Da
IEP (calculated)
6.942
GRAVY (calculated)
0.292
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTFILGIA NLIGGLPHVF HNITDLRDSR VMNEDKSEGR PLLTQAWMWS KARLHMVLPL LSHMVFGLLP PVLCGLSFRE SNDRENKMMD VASASLACIA
101: LLALGKVMAT EEP
101: LLALGKVMAT EEP
001: MEKSNQPVHV TLSELKDGDK EIVDAEFLVD LLESYRFGKD NVPAREFRSK AAATAPAPVN TTEIELEEDN DGSQAQDPIV LESTVSETGS NEESETGSNE
101: ENGNNWLESS STNLPNVENK RQRNGEDCEI EEEEENNERS LSDSEEKSNL EKLLGTQENY ELGNEDEEKN ERSSSDSEEK SNLENLLATQ ENYELYCPSC
201: STCITRNVVL KKRKRGKHVN SSLDLKPDIP VVEPDEPSDI EEMESPVKVY VPETRIEDDQ EDKEGTIFTC LVCDLKYFIR LGTKFLQLDY IRGKPVEKSV
301: EEYIDVRKSI NTTQSPPQIQ PDGERFAIEL LKSTVYGGLT ETITSLGVVS SASASGSSTM NILALAVANL AGGLIVLAQN FQDLRNSSDQ EKDRYEELLG
401: RRTKSRIHIL VAVMSYIFFG LIPPLVYAFS FYETGIKNYK LISVFLGSLV CVILLGSIKV YVRKPTNSCG STKAYLKSAA YYTSIVVASC GISYVVGDIM
501: GEYIEKLSLV GLDQISITSP CYGIKPEECR FTSF
101: ENGNNWLESS STNLPNVENK RQRNGEDCEI EEEEENNERS LSDSEEKSNL EKLLGTQENY ELGNEDEEKN ERSSSDSEEK SNLENLLATQ ENYELYCPSC
201: STCITRNVVL KKRKRGKHVN SSLDLKPDIP VVEPDEPSDI EEMESPVKVY VPETRIEDDQ EDKEGTIFTC LVCDLKYFIR LGTKFLQLDY IRGKPVEKSV
301: EEYIDVRKSI NTTQSPPQIQ PDGERFAIEL LKSTVYGGLT ETITSLGVVS SASASGSSTM NILALAVANL AGGLIVLAQN FQDLRNSSDQ EKDRYEELLG
401: RRTKSRIHIL VAVMSYIFFG LIPPLVYAFS FYETGIKNYK LISVFLGSLV CVILLGSIKV YVRKPTNSCG STKAYLKSAA YYTSIVVASC GISYVVGDIM
501: GEYIEKLSLV GLDQISITSP CYGIKPEECR FTSF
Arabidopsis Description
MEB2Membrane protein of ER body 2 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.