CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019020.1-P	Field mustard	plasma membrane, plastid	92.28	91.61
TraesCS7B01G200500.1	Wheat	extracellular	16.18	38.6
VIT_00s0245g00030.t01	Wine grape	plasma membrane	27.21	37.19
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	35.29	34.41
TraesCS6B01G375800.1	Wheat	extracellular	13.6	32.74
CDY31395	Canola	plasma membrane	23.16	32.14
CDX92846	Canola	cytosol, nucleus, plasma membrane	66.91	29.64
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	33.46	29.64
CDY29865	Canola	cytosol, nucleus, plasma membrane	66.91	29.17
TraesCS4A01G141900.1	Wheat	extracellular	12.5	28.57
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	34.93	28.53
VIT_00s0245g00010.t01	Wine grape	cytosol	34.19	25.48
VIT_00s0267g00030.t01	Wine grape	cytosol	36.76	25.0
GSMUA_Achr1P20170_001	Banana	nucleus	37.87	22.94
KRH66122	Soybean	cytosol	36.4	21.9
CDX89222	Canola	nucleus	63.6	21.9
CDY19019	Canola	nucleus	62.87	21.73
AT4G27870.2	Thale cress	nucleus	61.03	21.25
CDX80427	Canola	cytosol, nucleus, plasma membrane	34.93	19.55
CDX97398	Canola	mitochondrion, plasma membrane, plastid	31.62	18.34
Solyc09g059460.2.1	Tomato	cytosol	33.46	18.09
CDX88089	Canola	cytosol, nucleus, plasma membrane	34.93	17.69
CDY19020	Canola	cytosol, nucleus, plasma membrane	35.66	16.36
KRH72565	Soybean	cytosol, nucleus	33.09	16.22
CDY31394	Canola	cytosol, nucleus, plasma membrane	34.93	16.02
CDY67233	Canola	cytosol, nucleus, plasma membrane	34.93	16.02
CDX89223	Canola	cytosol, nucleus, plasma membrane	34.93	15.91
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	33.82	15.83
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	33.09	13.98
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	33.09	13.91
CDY14269	Canola	cytosol	29.41	13.86
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	33.09	13.66
CDX89224	Canola	cytosol, nucleus, plasma membrane	29.41	13.24
Os06t0103800-01	Rice	plasma membrane	34.56	12.5
TraesCS4A01G457600.2	Wheat	nucleus	35.66	12.42
OQU75676	Sorghum	plasma membrane	33.09	12.13
TraesCS4A01G457700.2	Wheat	nucleus	36.03	11.45
KRH16940	Soybean	cytosol, nucleus, plasma membrane	33.46	11.08
TraesCS7D01G027900.2	Wheat	nucleus	35.29	11.02
Zm00001d035875_P002	Maize	nucleus	33.82	11.02
TraesCS7D01G028000.1	Wheat	nucleus	35.29	11.0
HORVU7Hr1G003870.3	Barley	nucleus	35.66	10.95
TraesCS7A01G031400.2	Wheat	nucleus	35.29	10.92
CDY19021	Canola	cytosol, nucleus, plasma membrane	17.28	9.81
Solyc03g096800.2.1	Tomato	nucleus	36.03	8.43
HORVU7Hr1G003880.2	Barley	nucleus	2.57	1.67

Protein Annotations

EnsemblPlants:CDX92847	EnsemblPlantsGene:GSBRNA2T00154683001	GO:A0A078DVD2	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	ProteinID:CDX92847
ProteinID:CDX92847.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EAC964	MapMan:24.2.12.2	:

Description

BnaC07g41050D

Coordinates

chrLK031873:+:1109299..1110494

Molecular Weight (calculated)

29430.2 Da

IEP (calculated)

10.369

GRAVY (calculated)

0.129

Length

272 amino acids

Sequence
(BLAST)

001: MRSSLPVSTQ QKMANDDRKK PPKKKGRLTP MRASLPVSNP VTLAEPLLIT PVVEGRKVEI LKSIVYGGLA EAITSLGVIS SAAGSGASTL NILVLGLANL
101: FGGLVLIIHN LHEIRKEEVP IRETTAESQT NGPKESRYKR LLGRRENFML HATVAILSFI ITGLLPPVVY YFSFSKAHNK DYKVASVFGA SLICIALLAL
201: AKAHVKNPRS SYFKSVLYYA ATAVSVSGIT YVVGNVVNQL IEKYGWSETP AGEMMLSLMG RKAGGFGYSS PY

Best Arabidopsis Sequence Match ( AT4G27870.1 )
(BLAST)

001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y

Arabidopsis Description

Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.