Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 18.24 | 63.66 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 4.13 | 42.48 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 3.96 | 40.35 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 9.38 | 39.07 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 14.03 | 36.3 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 8.52 | 36.13 |
| CDX92847 | Canola | plastid | 8.43 | 36.03 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 9.21 | 34.85 |
| CDY31395 | Canola | plasma membrane | 5.51 | 32.65 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 3.18 | 31.09 |
| Solyc09g059460.2.1 | Tomato | cytosol | 12.56 | 29.03 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 10.76 | 25.72 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 13.77 | 25.12 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 13.17 | 24.92 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 13.25 | 24.68 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 10.93 | 24.47 |
| Os06t0103800-01 | Rice | plasma membrane | 15.66 | 24.2 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 17.04 | 24.12 |
| AT5G24290.1 | Thale cress | cytosol | 11.36 | 24.0 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 10.93 | 23.65 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 15.83 | 23.56 |
| AT4G27860.3 | Thale cress | nucleus | 12.31 | 23.03 |
| Bra026302.1-P | Field mustard | nucleus | 15.49 | 22.84 |
| CDX89222 | Canola | nucleus | 15.15 | 22.28 |
| OQU75676 | Sorghum | plasma membrane | 14.2 | 22.24 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 11.36 | 22.11 |
| CDY19019 | Canola | nucleus | 14.97 | 22.11 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 16.61 | 22.11 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 11.27 | 22.05 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 11.19 | 21.92 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 11.19 | 21.92 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 11.19 | 21.92 |
| AT4G27870.2 | Thale cress | nucleus | 14.72 | 21.89 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 8.78 | 21.75 |
| Zm00001d035875_P002 | Maize | nucleus | 15.58 | 21.68 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 12.22 | 21.55 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 16.27 | 21.5 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 16.09 | 21.47 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 16.35 | 21.44 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 15.58 | 21.14 |
| KRH72565 | Soybean | cytosol, nucleus | 9.9 | 20.72 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 11.36 | 20.4 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 11.27 | 20.34 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 10.33 | 19.87 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 10.24 | 19.87 |
| CDY14269 | Canola | cytosol | 9.21 | 18.54 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 6.02 | 16.71 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 6.71 | 16.28 |
| Bra010393.1-P | Field mustard | nucleus | 9.64 | 15.86 |
Protein Annotations
| MapMan:24.2.12.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006880 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010168 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | UniProt:K4BJ98 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF16 | EnsemblPlantsGene:Solyc03g096800.2 | EnsemblPlants:Solyc03g096800.2.1 | TMHMM:TMhelix | UniParc:UPI0002767DEF | SEG:seg |
Description
No Description!
Coordinates
chr3:+:59152559..59163067
Molecular Weight (calculated)
126766.0 Da
IEP (calculated)
4.325
GRAVY (calculated)
-0.535
Length
1162 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVVDWKWEQ NEMEVEEGGG GLQVRSSKVT KEVTNVKIEI NGYGNSSLQM TNGTEKSDLG DVQERSEEEK LSDSINGVEV EEGTEPKDEL VEQIVVSNNG
0101: VEEKSGLDDE QERSEEHISD FNNGVEEGTE KSDLADELKG SEEEHISDSY NGVEVEEETK PKEESAQHIL LSNNGVEVEV QGDTKPKEES VQKIVASNNG
0201: VEERTEPKEE SVQKIVASNY WVEEGTEPKE ESKQHLVTFT NGVEVEEGAE ESIQQIVVSN NGVEVGTEPK EDSVQQIVVV SNNGVEEGTE AKEESKEHLV
0301: TFTNGVEVEE GAEDSIQHIV VSNNEVEERT EPQKESKQHL VISTNGVEEG TEAEEGPFGS GHSVYYDKDE DSSFISTPSI KEKIDKIPGD EGVQESATLD
0401: IHLNGYLKSY NLSSSSVQFS KNLSEDHSIV HKSTAVDEIE SADPDLIDDS DTDVKDFDVE NVLQKQNTHD LYCPNCKSCI TKRVILRKRK RKIRGSGDDV
0501: KRVKPEVVVD SKVDASHVQA ADDEVRDGAD SYLDGTPPLA ADDYHPDREP ELFRCLSCFS FFIPAGNGFK LPHIFGKNGA KESVKGEQTP TKNKKWFIFG
0601: GLDKGKAPVE QGSGIGASAV INDSGVLMPS APPAYSSSEI TQEAGGKFLG STNQDANMKG KMVIDTVGKS ENATKSREGG SVFDFFDSET HNQPTVSASS
0701: NEVQGNDKND ELLRNTGRLQ VSNGNLVQET PPASSDKKDE LLRPGGKIQV SNGNLVQDSL PASQQNELKL LITSTKEESL TIEKPETDLK SDVAILNKDP
0801: ATTGFALNGL DGNGKPKFLT EIPHEHVQHI EAMLPSESLV ANNDNKFQLS SEDGAHHYEV SKHTITKTNI EIHSNQPLNV AEHDLISSVK DALSIQDAPD
0901: NIPNISVVAA ANNIAGNDTI ITVEAGNETR ETASANVDTQ IDSVEGQATD GADGYKIEII KSIIFGGLAE SITSLSVVAS ATGGDTTTLN ILVLAMANLF
1001: GGLFIIFHNL WELKRDRFEQ ASNQIMEKQV DRYREQLGRR ENFILHVVLV ILSYIIFGLL PPVTYGFSFR KSDDKDLKIV AVAAASLVCI LMLATGKAYV
1101: QRAPKPYFKT ISTYIVLGFT VSGVSYAAGI LFNRLLEKLG LFKPSSTVNL FLPETGAAWA SF
0101: VEEKSGLDDE QERSEEHISD FNNGVEEGTE KSDLADELKG SEEEHISDSY NGVEVEEETK PKEESAQHIL LSNNGVEVEV QGDTKPKEES VQKIVASNNG
0201: VEERTEPKEE SVQKIVASNY WVEEGTEPKE ESKQHLVTFT NGVEVEEGAE ESIQQIVVSN NGVEVGTEPK EDSVQQIVVV SNNGVEEGTE AKEESKEHLV
0301: TFTNGVEVEE GAEDSIQHIV VSNNEVEERT EPQKESKQHL VISTNGVEEG TEAEEGPFGS GHSVYYDKDE DSSFISTPSI KEKIDKIPGD EGVQESATLD
0401: IHLNGYLKSY NLSSSSVQFS KNLSEDHSIV HKSTAVDEIE SADPDLIDDS DTDVKDFDVE NVLQKQNTHD LYCPNCKSCI TKRVILRKRK RKIRGSGDDV
0501: KRVKPEVVVD SKVDASHVQA ADDEVRDGAD SYLDGTPPLA ADDYHPDREP ELFRCLSCFS FFIPAGNGFK LPHIFGKNGA KESVKGEQTP TKNKKWFIFG
0601: GLDKGKAPVE QGSGIGASAV INDSGVLMPS APPAYSSSEI TQEAGGKFLG STNQDANMKG KMVIDTVGKS ENATKSREGG SVFDFFDSET HNQPTVSASS
0701: NEVQGNDKND ELLRNTGRLQ VSNGNLVQET PPASSDKKDE LLRPGGKIQV SNGNLVQDSL PASQQNELKL LITSTKEESL TIEKPETDLK SDVAILNKDP
0801: ATTGFALNGL DGNGKPKFLT EIPHEHVQHI EAMLPSESLV ANNDNKFQLS SEDGAHHYEV SKHTITKTNI EIHSNQPLNV AEHDLISSVK DALSIQDAPD
0901: NIPNISVVAA ANNIAGNDTI ITVEAGNETR ETASANVDTQ IDSVEGQATD GADGYKIEII KSIIFGGLAE SITSLSVVAS ATGGDTTTLN ILVLAMANLF
1001: GGLFIIFHNL WELKRDRFEQ ASNQIMEKQV DRYREQLGRR ENFILHVVLV ILSYIIFGLL PPVTYGFSFR KSDDKDLKIV AVAAASLVCI LMLATGKAYV
1101: QRAPKPYFKT ISTYIVLGFT VSGVSYAAGI LFNRLLEKLG LFKPSSTVNL FLPETGAAWA SF
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.