CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97398	Canola	mitochondrion, plasma membrane, plastid	60.66	74.63
CDY31395	Canola	plasma membrane	20.62	60.71
Bra010393.1-P	Field mustard	nucleus	62.22	50.85
CDX89224	Canola	cytosol, nucleus, plasma membrane	33.8	32.28
CDX92847	Canola	plastid	13.86	29.41
TraesCS6B01G375800.1	Wheat	extracellular	5.2	26.55
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	12.65	26.16
VIT_00s0245g00030.t01	Wine grape	plasma membrane	9.01	26.13
TraesCS7B01G200500.1	Wheat	extracellular	5.03	25.44
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	13.0	24.43
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	13.86	24.02
VIT_00s0267g00030.t01	Wine grape	cytosol	15.6	22.5
VIT_00s0245g00010.t01	Wine grape	cytosol	14.21	22.47
CDY19021	Canola	cytosol, nucleus, plasma membrane	18.37	22.13
CDY19020	Canola	cytosol, nucleus, plasma membrane	21.66	21.08
CDY67233	Canola	cytosol, nucleus, plasma membrane	21.14	20.57
CDY31394	Canola	cytosol, nucleus, plasma membrane	21.14	20.57
GSMUA_Achr1P20170_001	Banana	nucleus	15.94	20.49
CDX89223	Canola	cytosol, nucleus, plasma membrane	21.14	20.44
CDX80427	Canola	cytosol, nucleus, plasma membrane	16.81	19.96
KRH66122	Soybean	cytosol	15.42	19.69
TraesCS4A01G141900.1	Wheat	extracellular	3.99	19.33
CDX88089	Canola	cytosol, nucleus, plasma membrane	17.5	18.81
Solyc09g059460.2.1	Tomato	cytosol	15.6	17.89
CDY29865	Canola	cytosol, nucleus, plasma membrane	18.37	16.99
CDX92846	Canola	cytosol, nucleus, plasma membrane	17.16	16.12
CDX89222	Canola	nucleus	22.01	16.08
CDY19019	Canola	nucleus	21.84	16.01
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	16.12	16.01
Os06t0103800-01	Rice	plasma membrane	19.93	15.29
KRH72565	Soybean	cytosol, nucleus	14.56	15.14
OQU75676	Sorghum	plasma membrane	18.2	14.15
TraesCS4A01G457600.2	Wheat	nucleus	19.06	14.08
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	15.6	13.66
Zm00001d035875_P002	Maize	nucleus	19.76	13.65
TraesCS7D01G027900.2	Wheat	nucleus	20.1	13.32
KRH16940	Soybean	cytosol, nucleus, plasma membrane	18.89	13.28
TraesCS7A01G031400.2	Wheat	nucleus	19.93	13.08
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	14.38	12.83
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	14.21	12.73
TraesCS4A01G457700.2	Wheat	nucleus	18.54	12.5
HORVU7Hr1G003870.3	Barley	nucleus	18.89	12.3
TraesCS7D01G028000.1	Wheat	nucleus	17.85	11.8
Solyc03g096800.2.1	Tomato	nucleus	18.54	9.21
HORVU7Hr1G003880.2	Barley	nucleus	4.68	6.44

Protein Annotations

EnsemblPlants:CDY14269	EnsemblPlantsGene:GSBRNA2T00078853001	GO:A0A078FN03	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	ProteinID:CDY14269	ProteinID:CDY14269.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EDD8B5	UniProt:A0A078FN03	MapMan:24.2.12.2	:	:	:

Description

BnaA08g14000DBnaA08g14000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN03]

Coordinates

chrLK032041:-:556675..559654

Molecular Weight (calculated)

64042.0 Da

IEP (calculated)

7.867

GRAVY (calculated)

-0.149

Length

577 amino acids

Sequence
(BLAST)

001: MDQNVKEIGN SSTPADSGDL PSDEVLPAPT DVPPLQVTDC GTGTKSNSNG SDTKNEVEAN REEKLVEKEA KGSSRTNVED KRSPEDVLKE MQMQKTHDLY
101: CPNCTHNITR TAELFEKGKE KFQYNNENSI LSFVIVVYFK YPFVFLPWLY SNTPETFLAF NEEKTKNRLL NIRYNRPSDE RAPSVVSETP KKHVPDWLRF
201: VLVVVLLLPS ALVLLWVPPS PSPLSPSPIP PPTPHTNGND KPIWPSPSTI VNKGGLVHFY WVKYLPSSRV LYVISLLLLA ALALCWPSMT QTKGTEPEGK
301: ADLPNEKEVL GDKEGVPSLI GGLSTRGNKT NGSERAKEIP PPPMAPQPTT FAKTLIILRQ HIVVPVHNVL QTELDILKSI VYGGLIESIT SFGVVSSAAA
401: SGTSTLNVMA LGLANFIQWP ISHHLQQDLF WQLYGLVMSE RFFPHAHIDN ATDMKDKIDP YKQLLGNRNN VVLHCIVVVV SFIFFGVIPP LFYGFSFKTT
501: DNRYYEATVF VAASLLCVIT LSFGKAHAFK KDKLKTVAVY TGIAIGASAF SCIASQHVRG LLEKYEFHKI ASEFAKK

Best Arabidopsis Sequence Match ( AT4G27860.1 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTDNKRNRLT PIYPSSLEKP SKQTVNKETQ NHDKEAADPD QDVDKETENQ KSHLTPIYPS PLEQPSKQII NKETQTEPML PPNAQSEIPN
401: SVEPRKGGNK VEILKSIVYG GLTESITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLT VHSLQELINE KPRKQTNTDD SPEEGEGEED RYEEVLGRRE
501: YSRIHRVIAI SSFVIFGLIP PLVYGFSFRK KMEKRQEYKV LAVYAVSLLC IVLLSIAKAY VSKKRDYVKT LFRYTTTATT ASGFSQFVGY LVSQWLEKSG
601: FYDDSPETQR V

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [cytosol,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.