Factsheet for TraesCS4A01G458000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	70.71	72.02
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	33.08	71.01
TraesCS7B01G200500.1	Wheat	extracellular	11.99	69.3
TraesCS6B01G375800.1	Wheat	extracellular	11.23	65.49
TraesCS4A01G141900.1	Wheat	extracellular	9.41	52.1
TraesCS4A01G457600.2	Wheat	nucleus	48.41	40.85
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	15.17	35.84
VIT_00s0245g00030.t01	Wine grape	plasma membrane	10.17	33.67
CDX92847	Canola	plastid	13.66	33.09
TraesCS4A01G457700.2	Wheat	nucleus	42.64	32.83
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	16.54	32.73
Bra019020.1-P	Field mustard	plasma membrane, plastid	13.35	32.12
TraesCS7A01G031400.2	Wheat	nucleus	42.79	32.08
CDY31395	Canola	plasma membrane	9.1	30.61
GSMUA_Achr1P20170_001	Banana	nucleus	18.36	26.95
VIT_00s0245g00010.t01	Wine grape	cytosol	13.35	24.11
VIT_00s0267g00030.t01	Wine grape	cytosol	14.42	23.75
Solyc09g059460.2.1	Tomato	cytosol	17.75	23.26
KRH66122	Soybean	cytosol	15.93	23.23
CDX92846	Canola	cytosol, nucleus, plasma membrane	19.12	20.52
CDX80427	Canola	cytosol, nucleus, plasma membrane	15.02	20.37
KRH72565	Soybean	cytosol, nucleus	17.15	20.36
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.63	19.85
CDY19019	Canola	nucleus	23.37	19.57
CDX89222	Canola	nucleus	23.37	19.49
Bra026302.1-P	Field mustard	nucleus	23.22	19.42
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.66	19.31
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	17.0	19.28
CDY29865	Canola	cytosol, nucleus, plasma membrane	18.21	19.23
CDX88089	Canola	cytosol, nucleus, plasma membrane	15.48	18.99
CDX97398	Canola	mitochondrion, plasma membrane, plastid	12.75	17.91
AT5G24290.1	Thale cress	cytosol	14.87	17.82
AT4G27870.2	Thale cress	nucleus	21.09	17.8
CDY67233	Canola	cytosol, nucleus, plasma membrane	15.17	16.86
CDY31394	Canola	cytosol, nucleus, plasma membrane	15.17	16.86
CDY19020	Canola	cytosol, nucleus, plasma membrane	15.17	16.86
CDX89223	Canola	cytosol, nucleus, plasma membrane	15.17	16.75
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.02	16.67
KRH16940	Soybean	cytosol, nucleus, plasma membrane	20.49	16.44
AT4G27860.3	Thale cress	nucleus	15.33	16.26
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.72	16.19
CDX89224	Canola	cytosol, nucleus, plasma membrane	14.57	15.89
CDY14269	Canola	cytosol	13.66	15.6
Bra010393.1-P	Field mustard	nucleus	14.42	13.46
CDY19021	Canola	cytosol, nucleus, plasma membrane	9.71	13.36
Solyc03g096800.2.1	Tomato	nucleus	21.55	12.22

Protein Annotations

EnsemblPlants:TraesCS4A01G458000.1	EnsemblPlantsGene:TraesCS4A01G458000	ncoils:Coil	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	SEG:seg
TIGR:cd01059	TMHMM:TMhelix	MapMan:24.2.12.2	:	:	:

Description

No Description!

Coordinates

chr4A:-:723018336..723023115

Molecular Weight (calculated)

71157.1 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.337

Length

659 amino acids

Sequence
(BLAST)

001: MMEVAVESPQ GAAWDHFKEE VEIMEEDGGA AAAVAAAAAA AARELLTREI KKRLLDHTHE NGNGHGHANG GGPEELEATP EVEEEDAPQE PKVAEEEQQR
101: HKSTFFDAAK GLWKCWHCDW AYRLASRCGN STAAAAAATP GELLTRQIKK RLLVHAHENG NGHGHVNGEE AEELEASEEE QKEEEEAPDE PKVAEEEQQP
201: HKSIFFDAAK GLWKCRHCDW TYRLSSPCGN GTVEHRGLLK PEHLAVESYS ENQAAADPVT MPLQSEMQDS IDTSTKTESR TYAHHSHGTI VKPEHSITES
301: SSEDHSTTTT TTTTTLATAT TSSTTTSAAA TTYSSSSTGI FHVEVMEEMT GEMPPPKRAD GVIMDAIHHL LGHEDVHGTT TTTFENGSLT THVSHTTELK
401: VDCLNVTTMA RGNIPTSPIP QAADQPYVAV SVPEDLNPAA HSPQQSDEWD IPKAIVYGGL VESVTSLSVV SAAASSGAKT LDIFILGIAN LMGGLPLIFH
501: NIADLRDIRD VTEDNERVGH YWLQLGRRSK ARLHMILALL SYIVFGLLPP ILYGLSFRES NDRENKMTAV AGASLACISF LALGKAHVKG APRTYFKTLM
601: YYLTVAVSSS GLSYVAGVLI TRLLVYFGII EQGGSAAPPS PGLSFPHSVG AQTSAWASF

Best Arabidopsis Sequence Match ( AT4G27870.1 )
(BLAST)

001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y

Arabidopsis Description

Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.