Factsheet for Bra026303.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19020	Canola	cytosol, nucleus, plasma membrane	94.44	94.6
AT4G27860.3	Thale cress	nucleus	51.52	49.28
Bra019020.1-P	Field mustard	plasma membrane, plastid	17.0	36.86
TraesCS7B01G200500.1	Wheat	extracellular	6.57	34.21
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	15.82	33.69
TraesCS6B01G375800.1	Wheat	extracellular	5.89	30.97
VIT_00s0245g00030.t01	Wine grape	plasma membrane	10.27	30.65
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	14.65	28.34
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	15.82	28.23
GSMUA_Achr1P20170_001	Banana	nucleus	20.2	26.73
VIT_00s0267g00030.t01	Wine grape	cytosol	17.51	26.0
VIT_00s0245g00010.t01	Wine grape	cytosol	15.66	25.48
TraesCS4A01G141900.1	Wheat	extracellular	4.88	24.37
KRH66122	Soybean	cytosol	16.67	21.9
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.52	21.19
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.04	20.87
Solyc09g059460.2.1	Tomato	cytosol	17.51	20.68
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.89	20.41
Bra026302.1-P	Field mustard	nucleus	24.75	18.65
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	18.01	18.42
Os06t0103800-01	Rice	plasma membrane	21.89	17.29
Bra010393.1-P	Field mustard	nucleus	20.2	17.0
OQU75676	Sorghum	plasma membrane	20.03	16.04
KRH72565	Soybean	cytosol, nucleus	14.98	16.04
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	16.67	15.37
TraesCS4A01G457600.2	Wheat	nucleus	19.87	15.11
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	16.67	15.02
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	16.33	14.99
Zm00001d035875_P002	Maize	nucleus	21.04	14.97
TraesCS4A01G457700.2	Wheat	nucleus	20.88	14.49
TraesCS7A01G031400.2	Wheat	nucleus	20.88	14.11
TraesCS7D01G027900.2	Wheat	nucleus	20.37	13.89
KRH16940	Soybean	cytosol, nucleus, plasma membrane	19.02	13.76
TraesCS7D01G028000.1	Wheat	nucleus	19.7	13.4
HORVU7Hr1G003870.3	Barley	nucleus	19.36	12.98
Solyc03g096800.2.1	Tomato	nucleus	22.05	11.27
HORVU7Hr1G003880.2	Barley	nucleus	4.88	6.92

Protein Annotations

EnsemblPlants:Bra026303.1	EnsemblPlants:Bra026303.1-P	EnsemblPlantsGene:Bra026303	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543F1F	UniProt:M4EBZ4
MapMan:24.2.12.2	:	:	:	:	:

Description

AT4G27860 (E=2e-098) | integral membrane family protein

Coordinates

chrA01:+:10127324..10129626

Molecular Weight (calculated)

66010.7 Da

IEP (calculated)

4.933

GRAVY (calculated)

-0.447

Length

594 amino acids

Sequence
(BLAST)

001: MESTATNQTP SPSSTVDDDN GDGVNTEEFT KLPPDSPHSS EDEDSVDFSH EQDSSLVPIG FELHDAIDTG SASRSVRGKD SQTERDFLDS DVEIVIKNQH
101: EYYFYCPCCG EDITKTVKLV KKSDIQPAKI TDNANKPIDT KNGSRSEDKK TKASSWFPVD LQKLFLSVYG HIKDKGKIEV DSKSTINDLG TNSEEPSIDV
201: KTEKGRPSFP KWYLDVFAWL FLCIIIALSF LFTSPQQSSP FIAPPHLELP SIPPLTLPSL SILWLLPAFS VLSLVIMAIR SGYIPIHHKE KGDKEVGSKS
301: TDTTSEEQIK KTKIEDGQAA DSCQDSDKKT DNQKVHPVLV DPPPPQEQPS MQIANKETPP KTQAEPGVQP DTQPEIPKSV ETPKGGNKLE ILKSIVYGGL
401: TQSITSLCTV TSAAASGAST LNVLALGVAN LSSGLLLIVH SLQELINEKP KTRTNTDDQK ESDADVEEEE EEDRYVEALG RREKWWFHRL IAISSFVVFG
501: LIPPLVYGFS FRRRVEKRQE YKTLAVYAVS LLCIVLLSVA KAYVSKRREY VKTLFRYTSM ATTASGFSTF MGYFVNQWLE KSGFYDESTE TPRV

Best Arabidopsis Sequence Match ( AT4G27860.2 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [cytosol,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.