Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.03 | 76.87 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 9.74 | 74.56 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 8.82 | 68.14 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 59.11 | 66.07 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 44.44 | 60.25 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 52.35 | 52.47 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 20.62 | 40.09 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 12.03 | 37.63 |
| CDX92847 | Canola | plastid | 11.0 | 35.29 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 11.0 | 35.04 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 7.79 | 34.17 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 12.83 | 33.63 |
| CDY31395 | Canola | plasma membrane | 7.33 | 32.65 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 12.94 | 28.25 |
| Solyc09g059460.2.1 | Tomato | cytosol | 16.27 | 28.23 |
| KRH66122 | Soybean | cytosol | 14.43 | 27.88 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 11.45 | 27.4 |
| CDX89222 | Canola | nucleus | 23.37 | 25.82 |
| CDY19019 | Canola | nucleus | 23.25 | 25.79 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 14.32 | 25.72 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 17.98 | 25.57 |
| Bra026302.1-P | Field mustard | nucleus | 22.57 | 25.0 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 17.98 | 24.65 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 16.04 | 24.1 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 17.18 | 24.04 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.09 | 23.7 |
| AT4G27870.2 | Thale cress | nucleus | 21.08 | 23.56 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 21.88 | 23.26 |
| AT5G24290.1 | Thale cress | cytosol | 14.55 | 23.09 |
| KRH72565 | Soybean | cytosol, nucleus | 14.66 | 23.06 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 14.09 | 22.91 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 11.57 | 21.54 |
| AT4G27860.3 | Thale cress | nucleus | 14.78 | 20.77 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 13.52 | 19.9 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 13.4 | 19.7 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 13.17 | 19.39 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 13.17 | 19.39 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 13.17 | 19.26 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 12.49 | 18.2 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 12.49 | 18.05 |
| CDY14269 | Canola | cytosol | 11.8 | 17.85 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 9.51 | 17.33 |
| Solyc03g096800.2.1 | Tomato | nucleus | 22.11 | 16.61 |
| Bra010393.1-P | Field mustard | nucleus | 13.29 | 16.43 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G028000.1 | EnsemblPlantsGene:TraesCS7D01G028000 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | SEG:seg | TIGR:cd01059 |
| TMHMM:TMhelix | MapMan:24.2.12.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:13658807..13663614
Molecular Weight (calculated)
94238.7 Da
IEP (calculated)
5.695
GRAVY (calculated)
-0.454
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVAVESPQ PAAWDHFKEE VEVMEAEGGG TAVATATATA AAAAAGELLT REIKNRLLVH AHENGNHGHD NGGEAEELKA HEEEEKKQEE APEEPKVAEE
101: EQQRHKSIFF DAAKGLWKCR HCDWTYRLSS PCGNGTVDHR GYRHRIERNI ESLVEKKGSF YGSPNKVPDI ITEVSARYLV TGTMRSGAEK QDANGNPSPK
201: GKELEAHENG SVQEINHGPN KGKLENGSHS NGSHQVPNGA EPKAEYLFEI NKTQMYPTEV DKDKHVTEAQ PKVEEYDLEK ILDQQETHDL FCPNCKSCIT
301: RRVILKKRKR TVRPATPDGP SKRPYTEEVT VPLPSATFPG SDEQESPNVF RCLSCFSFFI PAGCSFNIFR IFGRRDVDQV GVLPPRASED TPPRSENCTS
401: WLLSCFQPGD SPNQPHPADS VTVPLLSGTQ GSNNTTTTTE SSTSYVHHSH GTVVKPEQST VESSSENQTA PDPATTPLLS DTESPNDTTT TTESSTSYVH
501: HSHGIVVKPD HSITESSSED QTTTTTTTTT TSAIATTSST TTSAAAATHS SSAAGIFHSD VMEVITGDMP PLKPAGGVTM DATHHLLGHE DVHGTAPTTF
601: ENGSFTTHAS HTSTLKVDGP NMTTIGRGDM QTSPNAQPAD HVVVPVFGDV NQVAPRPQQR DDWDILKAIV YGGLVESVTS LSVVSAAASS GAKTLDIFIL
701: GIANLIGGLP LIYHNIADLR DIRDVNDDNE QVGHYWLQLG RRSKAQLHMV LALLSYMVFG LLPPVIYGLS FRESNDRENK MMAVAGASLA SIALLALGKA
801: HVQTAPRAYF KTLMYYLTIA VSSSGLSYVA GVLITRLLEH FGVIEQGGSA APAPPGLSFA HSVGAQTSAW ASF
101: EQQRHKSIFF DAAKGLWKCR HCDWTYRLSS PCGNGTVDHR GYRHRIERNI ESLVEKKGSF YGSPNKVPDI ITEVSARYLV TGTMRSGAEK QDANGNPSPK
201: GKELEAHENG SVQEINHGPN KGKLENGSHS NGSHQVPNGA EPKAEYLFEI NKTQMYPTEV DKDKHVTEAQ PKVEEYDLEK ILDQQETHDL FCPNCKSCIT
301: RRVILKKRKR TVRPATPDGP SKRPYTEEVT VPLPSATFPG SDEQESPNVF RCLSCFSFFI PAGCSFNIFR IFGRRDVDQV GVLPPRASED TPPRSENCTS
401: WLLSCFQPGD SPNQPHPADS VTVPLLSGTQ GSNNTTTTTE SSTSYVHHSH GTVVKPEQST VESSSENQTA PDPATTPLLS DTESPNDTTT TTESSTSYVH
501: HSHGIVVKPD HSITESSSED QTTTTTTTTT TSAIATTSST TTSAAAATHS SSAAGIFHSD VMEVITGDMP PLKPAGGVTM DATHHLLGHE DVHGTAPTTF
601: ENGSFTTHAS HTSTLKVDGP NMTTIGRGDM QTSPNAQPAD HVVVPVFGDV NQVAPRPQQR DDWDILKAIV YGGLVESVTS LSVVSAAASS GAKTLDIFIL
701: GIANLIGGLP LIYHNIADLR DIRDVNDDNE QVGHYWLQLG RRSKAQLHMV LALLSYMVFG LLPPVIYGLS FRESNDRENK MMAVAGASLA SIALLALGKA
801: HVQTAPRAYF KTLMYYLTIA VSSSGLSYVA GVLITRLLEH FGVIEQGGSA APAPPGLSFA HSVGAQTSAW ASF
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.