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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400071835 Potato cytosol, nucleus, plasma membrane 59.84 51.81
VIT_00s0245g00030.t01 Wine grape plasma membrane 15.71 39.7
TraesCS6B01G375800.1 Wheat extracellular 7.95 35.4
TraesCS7B01G200500.1 Wheat extracellular 7.75 34.21
Bra019020.1-P Field mustard plasma membrane, plastid 18.29 33.58
CDX92847 Canola plastid 18.09 33.46
GSMUA_Achr6P36880_001 Banana cytosol, nucleus, plasma membrane 18.49 33.33
CDY31395 Canola plasma membrane 12.52 32.14
TraesCS7A01G031500.1 Wheat cytosol, peroxisome, plasma membrane 19.28 31.6
VIT_00s0245g00010.t01 Wine grape cytosol 22.07 30.41
TraesCS4A01G141900.1 Wheat extracellular 7.16 30.25
VIT_00s0267g00030.t01 Wine grape cytosol 23.66 29.75
KRH66122 Soybean cytosol 25.05 27.88
GSMUA_Achr1P20170_001 Banana nucleus 24.65 27.62
Bra009746.1-P Field mustard cytosol, nucleus, plasma membrane 22.27 21.58
CDX80427 Canola cytosol, nucleus, plasma membrane 20.48 21.19
CDX88089 Canola cytosol, nucleus, plasma membrane 22.27 20.86
CDX92846 Canola cytosol, nucleus, plasma membrane 25.45 20.85
CDY29865 Canola cytosol, nucleus, plasma membrane 25.45 20.51
Bra019021.1-P Field mustard cytosol, nucleus, plasma membrane 25.45 20.09
CDX97398 Canola mitochondrion, plasma membrane, plastid 17.69 18.98
AT5G24290.1 Thale cress cytosol 20.28 18.55
OQU75676 Sorghum plasma membrane 26.64 18.06
CDY31394 Canola cytosol, nucleus, plasma membrane 21.07 17.88
CDY67233 Canola cytosol, nucleus, plasma membrane 21.07 17.88
TraesCS4A01G458000.1 Wheat cytosol, nucleus, plasma membrane 23.26 17.75
Os06t0103800-01 Rice plasma membrane 26.44 17.69
CDY19019 Canola nucleus 27.63 17.66
CDX89223 Canola cytosol, nucleus, plasma membrane 20.87 17.59
CDY19020 Canola cytosol, nucleus, plasma membrane 20.68 17.54
Bra026303.1-P Field mustard cytosol, nucleus, plasma membrane 20.68 17.51
AT4G27860.3 Thale cress nucleus 21.47 17.39
AT4G27870.2 Thale cress nucleus 26.84 17.29
CDX89222 Canola nucleus 26.84 17.09
TraesCS4A01G457600.2 Wheat nucleus 26.44 17.03
TraesCS7A01G031200.1 Wheat cytosol, nucleus, plasma membrane 21.87 17.0
TraesCS7D01G027600.1 Wheat cytosol, nucleus, plasma membrane 21.47 16.77
Zm00001d035875_P002 Maize nucleus 27.44 16.53
Bra026302.1-P Field mustard nucleus 25.65 16.37
TraesCS7D01G028000.1 Wheat nucleus 28.23 16.27
TraesCS4A01G457700.2 Wheat nucleus 27.44 16.12
TraesCS7D01G027900.2 Wheat nucleus 27.83 16.07
TraesCS7A01G031400.2 Wheat nucleus 27.83 15.93
HORVU7Hr1G003870.3 Barley nucleus 27.83 15.8
CDY14269 Canola cytosol 17.89 15.6
Bra026304.1-P Field mustard cytosol, nucleus, plasma membrane 18.09 15.19
CDX89224 Canola cytosol, nucleus, plasma membrane 17.69 14.74
Bra010393.1-P Field mustard nucleus 19.09 13.6
Solyc03g096800.2.1 Tomato nucleus 29.03 12.56
HORVU7Hr1G003880.2 Barley nucleus 9.54 11.46
CDY19021 Canola cytosol, nucleus, plasma membrane 10.54 11.06
Protein Annotations
EnsemblPlants:Solyc09g059460.2.1EnsemblPlantsGene:Solyc09g059460.2GO:GO:0005575GO:GO:0016020GO:GO:0016021PANTHER:PTHR38937
SEG:segTMHMM:TMhelixUniParc:UPI000276B74BUniProt:K4CTN1MapMan:24.2.12.2:
Description
No Description!
Coordinates
chr9:+:54526575..54530871
Molecular Weight (calculated)
54880.6 Da
IEP (calculated)
5.804
GRAVY (calculated)
-0.132
Length
503 amino acids
Sequence
(BLAST)
001: MAMEVAPQHN WAEMVEETVE EALIIRGARR SANVDGVVVN EDKVSSGSDG EEASKDKTKN NIYFNEVIDA VDFHVVLNGE NHGNGDIICG PPSLGHDESE
101: NPKGEIISDV CKPLLYGQND RENPKGEIVA QATTSSISKG SGNETIIEEQ VEEETVELEF FDTTSVDKLK HTHNAYCPKC NSHITKVVLR RVKRERRIII
201: ETHGQKSELL GCLSCFSVFV RIGKKLNPFP IFGNGGGTTS TEPHLPNINE GGFIPGIMPP KKSPTEIIED KGDDCRIPIL EDPRASPSTV NPSYPRRPVE
301: VKDSRSLEIV KCIVYGGLIE AITSLGIVSS AAASDADTMK IVTIGVANLI GGLFVICQNL VDLKYSVGGG SNYQVDRYGE LLGQRKHFLL HATFAILSYF
401: VFGLIPPVIY GFTFRKSDDR DYKLIAVAVA SLLCAIILAA AKAYTQAANK FSKYFKTILS YVIAAGMVSG VGYAAGHLIK RLMDDMGWFD SKPISQNPAW
501: ASY
Best Arabidopsis Sequence Match ( AT4G27870.1 )
(BLAST)
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.