Factsheet for Bra026304.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89224	Canola	cytosol, nucleus, plasma membrane	91.32	90.56
CDY19021	Canola	cytosol, nucleus, plasma membrane	38.56	48.23
TraesCS6B01G375800.1	Wheat	extracellular	5.51	29.2
Bra019020.1-P	Field mustard	plasma membrane, plastid	13.19	28.83
TraesCS7B01G200500.1	Wheat	extracellular	5.34	28.07
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	15.03	27.03
Bra010393.1-P	Field mustard	nucleus	31.05	26.35
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	12.02	25.81
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	12.85	25.08
VIT_00s0245g00030.t01	Wine grape	plasma membrane	8.18	24.62
VIT_00s0245g00010.t01	Wine grape	cytosol	14.36	23.56
VIT_00s0267g00030.t01	Wine grape	cytosol	14.69	22.0
GSMUA_Achr1P20170_001	Banana	nucleus	16.03	21.38
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	20.87	21.04
KRH66122	Soybean	cytosol	15.53	20.58
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.69	19.27
TraesCS4A01G141900.1	Wheat	extracellular	3.67	18.49
Solyc09g059460.2.1	Tomato	cytosol	15.19	18.09
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.53	17.43
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	16.36	16.87
Bra026302.1-P	Field mustard	nucleus	21.2	16.12
KRH72565	Soybean	cytosol, nucleus	14.52	15.68
Os06t0103800-01	Rice	plasma membrane	19.53	15.56
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	16.36	15.22
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	16.36	15.15
OQU75676	Sorghum	plasma membrane	18.53	14.96
TraesCS4A01G457600.2	Wheat	nucleus	19.37	14.85
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	16.19	14.72
TraesCS4A01G457700.2	Wheat	nucleus	19.37	13.55
Zm00001d035875_P002	Maize	nucleus	18.36	13.17
HORVU7Hr1G003870.3	Barley	nucleus	19.2	12.98
TraesCS7A01G031400.2	Wheat	nucleus	18.86	12.86
KRH16940	Soybean	cytosol, nucleus, plasma membrane	17.36	12.67
TraesCS7D01G027900.2	Wheat	nucleus	18.2	12.51
TraesCS7D01G028000.1	Wheat	nucleus	18.2	12.49
Solyc03g096800.2.1	Tomato	nucleus	19.87	10.24
HORVU7Hr1G003880.2	Barley	nucleus	4.67	6.68

Protein Annotations

EnsemblPlants:Bra026304.1	EnsemblPlants:Bra026304.1-P	EnsemblPlantsGene:Bra026304	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543F1E	UniProt:M4EBZ5
MapMan:24.2.12.2	:	:	:	:	:

Description

AT4G27860 (E=2e-026) | integral membrane family protein

Coordinates

chrA01:+:10123846..10126920

Molecular Weight (calculated)

66642.7 Da

IEP (calculated)

5.861

GRAVY (calculated)

-0.260

Length

599 amino acids

Sequence
(BLAST)

001: MDPTDTHSQE HEGDFINITQ LSNPAGDENV GHPSADEVTN QTDVSPPQVT ENSKETKCGT DKTQETSRKD DGPETENDVG KEKHLEKDHE GSWSKKGHED
101: VLKEIQMPKT HDLYCSNCTH KITGTAKLFK KGQETFPYNI DRFVFVIIFS FKYPFIYIPW LYNITQDPVK TIQSDPIHRP EEPDKTNQLL PPEEPVKRLK
201: IDQPIPPVSP KEPVKLNQPN PLPPKVPSDP KPDNTLATLL VNIREKLLQN RLPRLSPTSQ RFLLVLVLLL LSVILLLTLP SRPSDPSPPP PPPQRPSKHG
301: NSKETDVQLG PGENVPENGE GGDVSFSWLT NFLSSNYLSI ILLLFLAILA VLWRSMIEVR ENDPQDTGAV TNPQELDDVT DQAEDTNHPV GEVIRIKLLQ
401: LKLDILKSIV YGGLIESITS FGVVSSAAAS GTSTLNVLAL GLANLFSGLF IIIHNLYGLF KRPRYQSWNN DHMPELVSVD PYEELLGKRN KVILHCFVVL
501: ISFIFFGVIP PLFYGFSFKI TDKGRYQEAA IFVAASLVCV ISLSFAKAYA FGMDKLKTVA AYTGIAIGGS ALSFVASQHA RDVFANYDFH KLASDYLKG

Best Arabidopsis Sequence Match ( AT4G27860.2 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.