CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	90.56	91.32
CDY31395	Canola	plasma membrane	25.66	79.08
CDY19021	Canola	cytosol, nucleus, plasma membrane	44.87	56.58
CDX97398	Canola	mitochondrion, plasma membrane, plastid	30.3	39.02
CDY14269	Canola	cytosol	32.28	33.8
CDX92847	Canola	plastid	13.24	29.41
TraesCS6B01G375800.1	Wheat	extracellular	5.46	29.2
TraesCS7B01G200500.1	Wheat	extracellular	5.3	28.07
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	12.42	26.88
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	14.07	25.53
VIT_00s0245g00030.t01	Wine grape	plasma membrane	8.28	25.13
TraesCS7A01G031500.1	Wheat	cytosol, peroxisome, plasma membrane	12.58	24.76
VIT_00s0245g00010.t01	Wine grape	cytosol	13.91	23.01
VIT_00s0267g00030.t01	Wine grape	cytosol	14.74	22.25
CDY31394	Canola	cytosol, nucleus, plasma membrane	21.19	21.59
CDY67233	Canola	cytosol, nucleus, plasma membrane	21.19	21.59
GSMUA_Achr1P20170_001	Banana	nucleus	15.89	21.38
CDY19020	Canola	cytosol, nucleus, plasma membrane	20.86	21.25
CDX89223	Canola	cytosol, nucleus, plasma membrane	20.36	20.6
KRH66122	Soybean	cytosol	15.23	20.35
CDX80427	Canola	cytosol, nucleus, plasma membrane	15.07	18.72
TraesCS4A01G141900.1	Wheat	extracellular	3.64	18.49
CDX92846	Canola	cytosol, nucleus, plasma membrane	18.71	18.4
CDX88089	Canola	cytosol, nucleus, plasma membrane	16.23	18.25
CDY29865	Canola	cytosol, nucleus, plasma membrane	18.54	17.95
Solyc09g059460.2.1	Tomato	cytosol	14.74	17.69
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	16.56	17.21
CDY19019	Canola	nucleus	21.03	16.14
CDX89222	Canola	nucleus	21.03	16.08
KRH72565	Soybean	cytosol, nucleus	14.57	15.86
Os06t0103800-01	Rice	plasma membrane	19.37	15.56
TraesCS7D01G027600.1	Wheat	cytosol, nucleus, plasma membrane	16.56	15.53
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	16.56	15.46
OQU75676	Sorghum	plasma membrane	18.71	15.23
TraesCS4A01G457600.2	Wheat	nucleus	18.87	14.6
TraesCS4A01G458000.1	Wheat	cytosol, nucleus, plasma membrane	15.89	14.57
TraesCS4A01G457700.2	Wheat	nucleus	19.21	13.55
Zm00001d035875_P002	Maize	nucleus	18.38	13.29
HORVU7Hr1G003870.3	Barley	nucleus	19.04	12.98
TraesCS7D01G027900.2	Wheat	nucleus	18.38	12.74
TraesCS7A01G031400.2	Wheat	nucleus	18.54	12.74
KRH16940	Soybean	cytosol, nucleus, plasma membrane	17.22	12.67
TraesCS7D01G028000.1	Wheat	nucleus	18.05	12.49
Solyc03g096800.2.1	Tomato	nucleus	19.87	10.33
HORVU7Hr1G003880.2	Barley	nucleus	4.3	6.21

Protein Annotations

EnsemblPlants:CDX89224	EnsemblPlantsGene:GSBRNA2T00149411001	GO:A0A078DKR2	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	ProteinID:CDX89224
ProteinID:CDX89224.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDE661	MapMan:24.2.12.2	:

Description

BnaA01g16690D

Coordinates

chrLK031858:-:240017..243086

Molecular Weight (calculated)

67133.8 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.273

Length

604 amino acids

Sequence
(BLAST)

001: MDPTDTHSQE HEGDFNNITQ LSNPAGDENV DHPSADEVTN QTDVSPPQVT ENSKETKCGT DTTQETSRKD DGSAETENDV GKEKHLEEDH EGSWSNVEDK
101: KGHEDVLKEI QMPKTHDLYC SNCTHNITGT AKLFKKGQET FPYNIDRFVF VIIFSFKYPF IYIPWLYNIT QDPVKPIQSD PIHRPEEPDK TNQLLPPEEP
201: VKRLKIDQPI PPVSPKEPVK LSQPNPLPPN VPSDPKPDNT LATLLVNIRE KLLPNRLPRL SPTSQRFLLV LVLLLLSVIL LLTLPSRPSD PSPPPPPPQR
301: PSKHGNSKET DVQLGPGENV PENGEGGDVS FSWLTNFLSS NYLSIILLLF LAILAVLWRS MIEVRENDPQ DTGAVTNPQE LDDVTDQAED TNHPVGEVIR
401: IKLLQLKLDI LKSIVYGGLI ESITSFGVVS SAAASGTSTL NVLALGLANL FSGLFIIIHN LYGLFKRPRY QSWNNDHMPE LVSVDPYEEL LGKRNKVILH
501: CFVVLISFIF FGVIPPLFYG FSFKITDKGR YQEAAIFVAA SLVCVISLSF AKAYAFGMDK LKTVAAYTGI AIGGSALSFV ASQHARDVFA NYDFHKLTSD
601: YLKG

Best Arabidopsis Sequence Match ( AT4G27860.1 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTDNKRNRLT PIYPSSLEKP SKQTVNKETQ NHDKEAADPD QDVDKETENQ KSHLTPIYPS PLEQPSKQII NKETQTEPML PPNAQSEIPN
401: SVEPRKGGNK VEILKSIVYG GLTESITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLT VHSLQELINE KPRKQTNTDD SPEEGEGEED RYEEVLGRRE
501: YSRIHRVIAI SSFVIFGLIP PLVYGFSFRK KMEKRQEYKV LAVYAVSLLC IVLLSIAKAY VSKKRDYVKT LFRYTTTATT ASGFSQFVGY LVSQWLEKSG
601: FYDDSPETQR V

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.