Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 32.52 | 52.33 |
| GSMUA_Achr6P36870_001 | Banana | nucleus | 16.48 | 43.02 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 10.02 | 39.47 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 17.15 | 38.69 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 23.39 | 38.32 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 9.58 | 38.05 |
| CDX92847 | Canola | plastid | 22.94 | 37.87 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.72 | 36.16 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 25.84 | 34.83 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 8.91 | 33.61 |
| CDY31395 | Canola | plasma membrane | 14.48 | 33.16 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 28.51 | 32.0 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 25.61 | 31.51 |
| KRH66122 | Soybean | cytosol | 27.17 | 26.99 |
| Solyc09g059460.2.1 | Tomato | cytosol | 27.62 | 24.65 |
| OQU75676 | Sorghum | plasma membrane | 39.2 | 23.72 |
| Os06t0103800-01 | Rice | plasma membrane | 39.2 | 23.4 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 40.31 | 23.18 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 24.05 | 22.22 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 31.18 | 21.98 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 29.84 | 21.47 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 27.62 | 21.34 |
| Zm00001d035875_P002 | Maize | nucleus | 38.98 | 20.96 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 40.09 | 20.62 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 28.06 | 20.52 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 23.61 | 20.42 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 21.16 | 20.26 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 26.73 | 20.24 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 26.73 | 20.2 |
| AT4G27860.3 | Thale cress | nucleus | 27.84 | 20.13 |
| AT5G24290.1 | Thale cress | cytosol | 24.5 | 20.0 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 38.08 | 19.98 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 23.61 | 19.74 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 26.06 | 19.73 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 26.06 | 19.73 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 26.06 | 19.6 |
| AT4G27870.2 | Thale cress | nucleus | 33.63 | 19.33 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 38.08 | 19.3 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 37.42 | 19.11 |
| KRH72565 | Soybean | cytosol, nucleus | 23.61 | 19.1 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 36.97 | 19.06 |
| CDX89222 | Canola | nucleus | 33.18 | 18.86 |
| CDY19019 | Canola | nucleus | 32.96 | 18.81 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 26.73 | 18.55 |
| Bra026302.1-P | Field mustard | nucleus | 32.29 | 18.4 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 26.95 | 18.36 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 26.06 | 18.17 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 30.51 | 16.69 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 21.38 | 16.03 |
| CDY14269 | Canola | cytosol | 20.49 | 15.94 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 21.38 | 15.89 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 14.25 | 15.27 |
| Bra010393.1-P | Field mustard | nucleus | 22.27 | 14.16 |
| Solyc03g096800.2.1 | Tomato | nucleus | 36.3 | 14.03 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 13.59 | 12.73 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P20170_001 | EnsemblPlants:GSMUA_Achr1T20170_001 | EnsemblPlantsGene:GSMUA_Achr1G20170_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294C978 | UniProt:M0S1H5 |
| MapMan:24.2.12.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G20170_001]
Coordinates
chr1:+:15128936..15132868
Molecular Weight (calculated)
49210.6 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.254
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQKDDQIAT WEDISTEEVN HALNNMKMEN GSSSQCSSET SESQDEMAVQ QQIKLPKESK QKAVEFDLER ILEEQDTHDL YCPICDSCIT KKVILRKRKR
101: MVQHGGPSKK VNEEKYDAGK SDTGMTNPSD APEPDVFRCL SCFSFFMPTE GGFNIFQIFE KGKKIHAQSS PQVPEKKTNW IPSIFKADKS QMKPSQPGDG
201: AIQITSENDQ IIQRSEATAT EVLAHSDVRL DVAEQSARGP ETSNDWDVLK SIVYGGLAES IASLGVVSSA AAADASTLSI VALGLANLFG GFLLIIHKLF
301: ELRTARDVAT DHEEDERAGR YWELLGRKAN FRLHFVVVII SYLLVGSVPP VVYGFSFRGS DNKEHKLIAV AAASLLCIAL LATGKAHVGP QRAYTKTLFH
401: YLSLGVSASG VSYVAGVMAN KLLEKFGLFD GGMSGALNEP IMKCKVHAN
101: MVQHGGPSKK VNEEKYDAGK SDTGMTNPSD APEPDVFRCL SCFSFFMPTE GGFNIFQIFE KGKKIHAQSS PQVPEKKTNW IPSIFKADKS QMKPSQPGDG
201: AIQITSENDQ IIQRSEATAT EVLAHSDVRL DVAEQSARGP ETSNDWDVLK SIVYGGLAES IASLGVVSSA AAADASTLSI VALGLANLFG GFLLIIHKLF
301: ELRTARDVAT DHEEDERAGR YWELLGRKAN FRLHFVVVII SYLLVGSVPP VVYGFSFRGS DNKEHKLIAV AAASLLCIAL LATGKAHVGP QRAYTKTLFH
401: YLSLGVSASG VSYVAGVMAN KLLEKFGLFD GGMSGALNEP IMKCKVHAN
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP LAGEVIEEEV DFEDVEYHDV
201: ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF TIFIPKGVSS KPIPPRQGVE
301: GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA ATSIQVAKSN DTSEIVNNGA
401: IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK DTPDTSTADF GLTKVTGVMD
501: TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL GLANLLGGLI LIIHNLQELR
601: EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC IVLLAIAKAH VRYPRGSYLK
701: SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.