Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14269 | Canola | cytosol | 50.85 | 62.22 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 26.35 | 31.05 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 11.76 | 30.29 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 4.25 | 26.55 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 10.34 | 26.16 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 7.37 | 26.13 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 4.11 | 25.44 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 11.76 | 24.92 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 10.76 | 24.76 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 14.16 | 22.27 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 11.33 | 21.92 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 12.32 | 21.75 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 17.0 | 20.2 |
| KRH66122 | Soybean | cytosol | 12.89 | 20.13 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 14.31 | 19.46 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 3.26 | 19.33 |
| Solyc09g059460.2.1 | Tomato | cytosol | 13.6 | 19.09 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 16.71 | 18.52 |
| Bra026302.1-P | Field mustard | nucleus | 19.41 | 17.39 |
| Os06t0103800-01 | Rice | plasma membrane | 18.13 | 17.02 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 13.17 | 16.01 |
| KRH72565 | Soybean | cytosol, nucleus | 12.32 | 15.68 |
| OQU75676 | Sorghum | plasma membrane | 16.29 | 15.5 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 16.57 | 14.98 |
| Zm00001d035875_P002 | Maize | nucleus | 17.42 | 14.73 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 13.46 | 14.42 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 17.28 | 14.25 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 17.56 | 14.24 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 17.71 | 14.22 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 17.42 | 13.88 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 16.01 | 13.76 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 12.32 | 13.45 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 16.43 | 13.29 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 12.04 | 13.2 |
| Solyc03g096800.2.1 | Tomato | nucleus | 15.86 | 9.64 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 5.1 | 8.59 |
Protein Annotations
| EnsemblPlants:Bra010393.1 | EnsemblPlants:Bra010393.1-P | EnsemblPlantsGene:Bra010393 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000254568A | UniProt:M4D1P3 |
| MapMan:24.2.12.2 | : | : | : | : | : |
Description
AT4G27870 (E=7e-019) | integral membrane family protein
Coordinates
chrA08:-:14283467..14289981
Molecular Weight (calculated)
78939.1 Da
IEP (calculated)
7.064
GRAVY (calculated)
-0.375
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQNVKEIGN SSTPADSGDL PSDEVLPAPT DVPPLQVTDC GTGTKSNSNG SDTKNEVEAN REEKLVEKEA KGSSRTNVED KRSPEDVLKE MQMQKTHDLY
101: CPNCTHNITR TAELFEKGKE KFQYNNENSI LSFVIVVYFK YPFVFLPWLY SNTPVSPPSS FPTAWDEACE TVSSRDNRRI REPPGERDSH RLRVHRLLSS
201: TRATERERNR RFLEESTVRE QTPFPSSTRE TPVDVDGEDR DGEKIRHLRR LCGATEKRKR EREERKKRER LHRSSAQYAS DERAPSVVSE TPKKHVPDWL
301: RFVLVVVLLL PSALVLLWVP PSPSPLSPSP IPPPTPHTNG SLAIDIPDPQ KVPEDATEID GNLIPHGPDV VEDDKPIWPS PSTIVNKGGL VHFYWVKYLP
401: SSRVLYVISL LLLAALALCW PSMTQTKGTE PEEDEKEVLG DKEGVPSLIG GLSTRGNKTN GSERAKEIPP PPMAPQPTTF AKTLIILRQH IVVPVHNVLQ
501: TELDILKSIV YGGLIESITS FGVVSSAAAS GTSTLNVMAL GLANFIQWPI SHHLQQDLFW QLYGLVMSER FFPHAHIDNA TDMKDKIDPY KQLLGNRNNV
601: VLHCIVVVVS FIFFGVIPPL FYGFSFKTTD NRYYEATVFV AASLLCVITL SFGKAHAFKK DKLKTVAVYT GIAIGASAFS CIASQHVRGL LEKYEFHKIA
701: SEFAKK
101: CPNCTHNITR TAELFEKGKE KFQYNNENSI LSFVIVVYFK YPFVFLPWLY SNTPVSPPSS FPTAWDEACE TVSSRDNRRI REPPGERDSH RLRVHRLLSS
201: TRATERERNR RFLEESTVRE QTPFPSSTRE TPVDVDGEDR DGEKIRHLRR LCGATEKRKR EREERKKRER LHRSSAQYAS DERAPSVVSE TPKKHVPDWL
301: RFVLVVVLLL PSALVLLWVP PSPSPLSPSP IPPPTPHTNG SLAIDIPDPQ KVPEDATEID GNLIPHGPDV VEDDKPIWPS PSTIVNKGGL VHFYWVKYLP
401: SSRVLYVISL LLLAALALCW PSMTQTKGTE PEEDEKEVLG DKEGVPSLIG GLSTRGNKTN GSERAKEIPP PPMAPQPTTF AKTLIILRQH IVVPVHNVLQ
501: TELDILKSIV YGGLIESITS FGVVSSAAAS GTSTLNVMAL GLANFIQWPI SHHLQQDLFW QLYGLVMSER FFPHAHIDNA TDMKDKIDPY KQLLGNRNNV
601: VLHCIVVVVS FIFFGVIPPL FYGFSFKTTD NRYYEATVFV AASLLCVITL SFGKAHAFKK DKLKTVAVYT GIAIGASAFS CIASQHVRGL LEKYEFHKIA
701: SEFAKK
001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV
Arabidopsis Description
vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.