Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G003870.3 | Barley | nucleus | 47.97 | 22.69 |
| Os06t0103800-01 | Rice | plasma membrane | 32.22 | 17.95 |
| Zm00001d035875_P002 | Maize | nucleus | 34.13 | 17.13 |
| OQU75676 | Sorghum | plasma membrane | 28.64 | 16.17 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 15.27 | 14.25 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 21.24 | 10.84 |
| CDX89222 | Canola | nucleus | 20.05 | 10.63 |
| Bra026302.1-P | Field mustard | nucleus | 19.09 | 10.15 |
| CDY19019 | Canola | nucleus | 18.85 | 10.04 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 14.56 | 9.93 |
| AT4G27870.2 | Thale cress | nucleus | 18.14 | 9.73 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 11.22 | 9.67 |
| Solyc09g059460.2.1 | Tomato | cytosol | 11.46 | 9.54 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 11.69 | 9.12 |
| AT5G24290.1 | Thale cress | cytosol | 11.93 | 9.09 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 10.98 | 8.86 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 12.65 | 8.32 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 10.74 | 7.75 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 11.22 | 7.53 |
| KRH66122 | Soybean | cytosol | 7.64 | 7.08 |
| AT4G27860.3 | Thale cress | nucleus | 9.31 | 6.28 |
| Solyc03g096800.2.1 | Tomato | nucleus | 16.71 | 6.02 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 5.01 | 5.25 |
| Bra010393.1-P | Field mustard | nucleus | 8.59 | 5.1 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 5.73 | 5.01 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 6.92 | 4.89 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 6.92 | 4.89 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 6.92 | 4.88 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 6.92 | 4.86 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 6.68 | 4.72 |
| CDY14269 | Canola | cytosol | 6.44 | 4.68 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 6.68 | 4.67 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 4.06 | 4.66 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 6.21 | 4.3 |
| KRH72565 | Soybean | cytosol, nucleus | 5.25 | 3.96 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 3.1 | 3.9 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 3.82 | 3.41 |
| CDX92847 | Canola | plastid | 1.67 | 2.57 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 1.67 | 2.55 |
| CDY31395 | Canola | plasma membrane | 1.19 | 2.55 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 1.67 | 2.51 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 0.48 | 1.01 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 0.24 | 0.88 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 0.24 | 0.88 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G003880.2 | EnsemblPlantsGene:HORVU7Hr1G003880 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | SEG:seg | UniParc:UPI000B46B842 |
| UniProt:A0A287VEL2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:6749009..6752591
Molecular Weight (calculated)
45906.1 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.890
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAAEAGAH TQQPWGQFKE EVEIMEEEHG GGGADEVEEP LNRKIRKRPD LAHDHGSSNG NGNGNGNGAH HANGGGEEDH ARVGGEGEAV EEQQQHKSIF
101: FDPAKGLWKC RHCDWTYRLA SPCGNGILDH RGYHHQIPKS LVQKEPSYGS MNRGTMRSSA EKGDTNRTWT PKGKGLEAHE KGNAQEINHG PGNGKLDNGS
201: HSNGSHQAPN GAKPKIEYMF EINKTEIYPS EVNKDGQVAE AQAKVEEYDL EKILDEQETY ELQCPMCQSC ITRRVILKKR KRSVPTSPTG EPLKRPDFKG
301: AVPPVTSPDR VEGAPPDVFR CLSCFSFFIP TGCSFNIFRI FGWRDVGGQP DGLPPPASED TPPRSENCTS WLLSCFQPGD RPNQTAHAAD SLIVPLLPGT
401: PSSDDTTTIT ESSTSYVHH
101: FDPAKGLWKC RHCDWTYRLA SPCGNGILDH RGYHHQIPKS LVQKEPSYGS MNRGTMRSSA EKGDTNRTWT PKGKGLEAHE KGNAQEINHG PGNGKLDNGS
201: HSNGSHQAPN GAKPKIEYMF EINKTEIYPS EVNKDGQVAE AQAKVEEYDL EKILDEQETY ELQCPMCQSC ITRRVILKKR KRSVPTSPTG EPLKRPDFKG
301: AVPPVTSPDR VEGAPPDVFR CLSCFSFFIP TGCSFNIFRI FGWRDVGGQP DGLPPPASED TPPRSENCTS WLLSCFQPGD RPNQTAHAAD SLIVPLLPGT
401: PSSDDTTTIT ESSTSYVHH
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.