Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 42.55 | 48.15 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 41.64 | 44.12 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 41.64 | 42.64 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 16.55 | 32.62 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 6.36 | 30.97 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 11.09 | 30.65 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 6.0 | 28.95 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.91 | 26.71 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 20.0 | 24.5 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 16.18 | 24.38 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 14.73 | 24.32 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 17.64 | 24.25 |
| KRH66122 | Soybean | cytosol | 18.55 | 22.57 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 4.73 | 21.85 |
| Solyc09g059460.2.1 | Tomato | cytosol | 18.55 | 20.28 |
| AT4G27860.3 | Thale cress | nucleus | 20.55 | 18.2 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 18.36 | 17.38 |
| AT4G27870.2 | Thale cress | nucleus | 24.18 | 17.03 |
| OQU75676 | Sorghum | plasma membrane | 22.91 | 16.98 |
| Os06t0103800-01 | Rice | plasma membrane | 23.09 | 16.89 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 23.82 | 16.77 |
| KRH72565 | Soybean | cytosol, nucleus | 16.18 | 16.04 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 25.82 | 16.03 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 23.64 | 15.83 |
| Zm00001d035875_P002 | Maize | nucleus | 23.64 | 15.57 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 17.64 | 14.99 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 17.82 | 14.87 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 23.09 | 14.84 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 17.27 | 14.75 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 23.27 | 14.56 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 23.09 | 14.55 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 22.91 | 14.47 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 9.09 | 11.93 |
| Solyc03g096800.2.1 | Tomato | nucleus | 24.0 | 11.36 |
Protein Annotations
| MapMan:24.2.12.2 | EntrezGene:832496 | ProteinID:AED93280.1 | ProteinID:AED93281.1 | EMBL:AK228214 | EMBL:AK317370 |
| ArrayExpress:AT5G24290 | EnsemblPlantsGene:AT5G24290 | RefSeq:AT5G24290 | TAIR:AT5G24290 | RefSeq:AT5G24290-TAIR-G | EnsemblPlants:AT5G24290.1 |
| TAIR:AT5G24290.1 | EMBL:AY086399 | Unigene:At.8777 | ProteinID:BAB10395.1 | EMBL:BT008326 | UniProt:F4KFS7 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010168 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 |
| RefSeq:NP_568441.2 | RefSeq:NP_851067.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | TMHMM:TMhelix | UniParc:UPI000016256D | SEG:seg |
Description
MEB2Membrane protein of ER body 2 [Source:UniProtKB/Swiss-Prot;Acc:F4KFS7]
Coordinates
chr5:-:8263132..8265748
Molecular Weight (calculated)
61049.2 Da
IEP (calculated)
4.251
GRAVY (calculated)
-0.454
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSNQPVHV TLSELKDGDK EIVDAEFLVD LLESYRFGKD NVPAREFRSK AAATAPAPVN TTEIELEEDN DGSQAQGNNS VSESTSSLFS DSDPIVLEST
101: VSETGSNEES ETGSNEENGN NWLESSSTNL PNVENKRQRN GEDCEIEEEE ENNERSLSDS EEKSNLEKLL GTQENYELGN EDEEKNERSS SDSEEKSNLE
201: NLLATQENYE LYCPSCSTCI TRNVVLKKRK RGKHVNSSLD LKPDIPVVEP DEPSDIEEME SPVKVYVPET RIEDDQEDKE GTIFTCLVCD LKYFIRLGTK
301: FLQLDYIRGK PVEKSVEEYI DVRKSINTTQ SPPQIQPDGE RFAIELLKST VYGGLTETIT SLGVVSSASA SGSSTMNILA LAVANLAGGL IVLAQNFQDL
401: RNSSDQEKDR YEELLGRRTK SRIHILVAVM SYIFFGLIPP LVYAFSFYET GIKNYKLISV FLGSLVCVIL LGSIKVYVRK PTNSCGSTKA YLKSAAYYTS
501: IVVASCGISY VVGDIMGEYI EKLSLVGLDQ ISITSPCYGI KPEECRFTSF
101: VSETGSNEES ETGSNEENGN NWLESSSTNL PNVENKRQRN GEDCEIEEEE ENNERSLSDS EEKSNLEKLL GTQENYELGN EDEEKNERSS SDSEEKSNLE
201: NLLATQENYE LYCPSCSTCI TRNVVLKKRK RGKHVNSSLD LKPDIPVVEP DEPSDIEEME SPVKVYVPET RIEDDQEDKE GTIFTCLVCD LKYFIRLGTK
301: FLQLDYIRGK PVEKSVEEYI DVRKSINTTQ SPPQIQPDGE RFAIELLKST VYGGLTETIT SLGVVSSASA SGSSTMNILA LAVANLAGGL IVLAQNFQDL
401: RNSSDQEKDR YEELLGRRTK SRIHILVAVM SYIFFGLIPP LVYAFSFYET GIKNYKLISV FLGSLVCVIL LGSIKVYVRK PTNSCGSTKA YLKSAAYYTS
501: IVVASCGISY VVGDIMGEYI EKLSLVGLDQ ISITSPCYGI KPEECRFTSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.