Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 37.5 | 75.38 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 64.25 | 70.41 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 29.5 | 42.29 |
| CDX92847 | Canola | plastid | 25.0 | 36.76 |
| Bra019020.1-P | Field mustard | plasma membrane, plastid | 25.0 | 36.5 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 10.0 | 35.09 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 9.5 | 33.63 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.5 | 31.92 |
| KRH66122 | Soybean | cytosol | 32.5 | 28.76 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 32.0 | 28.51 |
| CDY31395 | Canola | plasma membrane | 13.25 | 27.04 |
| Solyc09g059460.2.1 | Tomato | cytosol | 29.75 | 23.66 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 7.0 | 23.53 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 29.75 | 20.48 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 24.5 | 20.16 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 22.0 | 18.76 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 27.25 | 18.38 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 27.25 | 18.38 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 27.25 | 18.26 |
| Bra019021.1-P | Field mustard | cytosol, nucleus, plasma membrane | 28.75 | 18.05 |
| Bra009746.1-P | Field mustard | cytosol, nucleus, plasma membrane | 23.25 | 17.92 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 24.0 | 17.88 |
| CDY19020 | Canola | cytosol, nucleus, plasma membrane | 26.5 | 17.88 |
| AT5G24290.1 | Thale cress | cytosol | 24.25 | 17.64 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 27.5 | 17.63 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 27.0 | 17.59 |
| AT4G27860.3 | Thale cress | nucleus | 27.25 | 17.55 |
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 26.0 | 17.51 |
| CDY14269 | Canola | cytosol | 22.5 | 15.6 |
| Os06t0103800-01 | Rice | plasma membrane | 29.0 | 15.43 |
| OQU75676 | Sorghum | plasma membrane | 28.5 | 15.36 |
| CDX89222 | Canola | nucleus | 30.0 | 15.19 |
| CDY19019 | Canola | nucleus | 29.75 | 15.12 |
| AT4G27870.2 | Thale cress | nucleus | 29.5 | 15.11 |
| Bra026302.1-P | Field mustard | nucleus | 29.75 | 15.1 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 22.25 | 14.74 |
| Bra026304.1-P | Field mustard | cytosol, nucleus, plasma membrane | 22.0 | 14.69 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 23.75 | 14.42 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 22.75 | 14.13 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 27.5 | 14.08 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 22.0 | 13.6 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 28.25 | 12.94 |
| Zm00001d035875_P002 | Maize | nucleus | 27.0 | 12.93 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 27.5 | 12.85 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 28.25 | 12.75 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 27.5 | 12.63 |
| Bra010393.1-P | Field mustard | nucleus | 21.75 | 12.32 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 26.75 | 12.17 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 13.25 | 11.06 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 5.25 | 5.01 |
Protein Annotations
| EntrezGene:100852932 | wikigene:100852932 | MapMan:24.2.12.2 | EMBL:AM431861 | ProteinID:CAN82446 | ProteinID:CAN82446.1 |
| ProteinID:CCB57313 | ProteinID:CCB57313.1 | UniProt:F6HRK5 | EMBL:FN596024 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010168 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 |
| GO:GO:0071421 | EntrezGene:LOC100852932 | wikigene:LOC100852932 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | TIGR:TC53870 |
| TMHMM:TMhelix | UniParc:UPI000210938F | ArrayExpress:VIT_00s0267g00030 | EnsemblPlantsGene:VIT_00s0267g00030 | EnsemblPlants:VIT_00s0267g00030.t01 | unigene:Vvi.14122 |
| RefSeq:XP_003635173 | RefSeq:XP_003635173.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:-:19519728..19526819
Molecular Weight (calculated)
42270.7 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.043
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQVMKPVGE EIKAADGSGG SGSSDAAGIG HITIDLIKKT DGDSDFKLGR FLEEPDSHKF RCPNCNACIE NINVVRRGEP GPIIPTYPGD PRGPIPTYPG
101: DPRGPIPTYP GDPRGPIPTY PGDPRGTIPT YPGDPPEQIT TYPGDPPEPM ICASCSSFLV FIGDKLTAMC NPQRQPQPEP EPGVPAKKWD ILKSIVYGGL
201: LESIASLTVV TSAAGADATA LKILALGLAN LIGGLFVIGH NLMELRNESN DQSGGSSTAN EETGRYHREL GLKENFKRHA TVAVLSFLLF GLVAPVTYSF
301: SFLKSGNKDL KLVAVAAASL VCITVLAIGK AYTQKASGFF GYIKTVSSFV IPGFMASGVS YVVGDLIKKL LEKLGLFESS SAFTLSLPGT ATPESGWGFY
101: DPRGPIPTYP GDPRGPIPTY PGDPRGTIPT YPGDPPEQIT TYPGDPPEPM ICASCSSFLV FIGDKLTAMC NPQRQPQPEP EPGVPAKKWD ILKSIVYGGL
201: LESIASLTVV TSAAGADATA LKILALGLAN LIGGLFVIGH NLMELRNESN DQSGGSSTAN EETGRYHREL GLKENFKRHA TVAVLSFLLF GLVAPVTYSF
301: SFLKSGNKDL KLVAVAAASL VCITVLAIGK AYTQKASGFF GYIKTVSSFV IPGFMASGVS YVVGDLIKKL LEKLGLFESS SAFTLSLPGT ATPESGWGFY
001: MGSAAELTEP TTGTEKLHQP IEVEEDDEQI VDLERKTFRH GKGHDTSVDS STITNTSSSS SSSFSGDGGT EETPDFHSNG DGEHTDLVNL EVPELETEIV
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
101: FHQEHDDGKN CIVFFDGEQG IWKCRHCDWT YKEGSLLCKG SESAGAIPDA HEESQTADLN GEQTQLEPEN GSTSEDNERS REIEEVLDGD VSKDLDAVDP
201: LAGEVIEEEV DFEDVEYHDV ENMMDKQETH DLYCPNCDSC ITKKVILKRR KRKIRRHELG DSKRPHLTEP LFHSEDNLPS LDGGENSANE SFVFKCLSCF
301: TIFIPKGVSS KPIPPRQGVE GLKIQPNPQV EATGDSNWFS SIFGLNKKES AIQQGGASSS VLEANPPPRE SIVPVVNPSR GNLSPMRKDT TGSAVVQPDA
401: ATSIQVAKSN DTSEIVNNGA IVGDGQKFLA PMVEEQTQQK IDNDDSSTAD GNHTSDKGRL SPIQPSHGMS ILNTVTNGPD GLKVETTIHE EGAPLLFEGK
501: DTPDTSTADF GLTKVTGVMD TGDRGVITGP ANPEIDISAG NLLEEGSLRE PLMRRVVVQG RKLEILKSIV YGGLLEAITS LGVISSAAGS GASMLNILVL
601: GLANLLGGLI LIIHNLQELR EEEPIRTTTE DNQTNGREEE EGRYKRLLGR RENFTLHATV AILSFIITGI LPPVVYYFSF SEKHNKDYKV ASVFGASLFC
701: IVLLAIAKAH VRYPRGSYLK SILYYGSIAV SVSGISYVVG NFLEQLLEKH GWSDGSETPV GQMMLSSLMG RKAGFGYSSS Y
Arabidopsis Description
Vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27870]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.