Factsheet for TraesCS7D01G027600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G031200.1	Wheat	cytosol, nucleus, plasma membrane	93.79	93.35
TraesCS7B01G200500.1	Wheat	extracellular	12.73	71.93
TraesCS6B01G375800.1	Wheat	extracellular	11.96	68.14
TraesCS7D01G028000.1	Wheat	nucleus	60.25	44.44
GSMUA_Achr6P36880_001	Banana	cytosol, nucleus, plasma membrane	15.37	35.48
VIT_00s0245g00030.t01	Wine grape	plasma membrane	10.56	34.17
CDX92847	Canola	plastid	13.98	33.09
Bra019020.1-P	Field mustard	plasma membrane, plastid	13.98	32.85
TraesCS7D01G027900.2	Wheat	nucleus	42.86	31.69
PGSC0003DMT400001535	Potato	cytosol, peroxisome, plasma membrane	16.15	31.23
CDY31395	Canola	plasma membrane	9.32	30.61
GSMUA_Achr1P20170_001	Banana	nucleus	18.17	26.06
VIT_00s0245g00010.t01	Wine grape	cytosol	13.82	24.38
KRH66122	Soybean	cytosol	16.46	23.45
VIT_00s0267g00030.t01	Wine grape	cytosol	14.13	22.75
Solyc09g059460.2.1	Tomato	cytosol	16.77	21.47
KRH72565	Soybean	cytosol, nucleus	17.86	20.72
CDX80427	Canola	cytosol, nucleus, plasma membrane	15.06	19.96
Bra019021.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.57	19.78
CDY29865	Canola	cytosol, nucleus, plasma membrane	18.94	19.55
CDX92846	Canola	cytosol, nucleus, plasma membrane	18.63	19.54
PGSC0003DMT400071835	Potato	cytosol, nucleus, plasma membrane	17.24	19.11
Bra009746.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.06	18.69
CDX97398	Canola	mitochondrion, plasma membrane, plastid	13.35	18.34
CDX89222	Canola	nucleus	22.36	18.23
CDY19019	Canola	nucleus	22.2	18.17
Bra026302.1-P	Field mustard	nucleus	22.05	18.02
CDX88089	Canola	cytosol, nucleus, plasma membrane	14.91	17.88
AT4G27870.2	Thale cress	nucleus	21.43	17.67
AT5G24290.1	Thale cress	cytosol	14.75	17.27
CDY19020	Canola	cytosol, nucleus, plasma membrane	15.37	16.69
Bra026303.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.37	16.67
KRH16940	Soybean	cytosol, nucleus, plasma membrane	21.12	16.57
CDX89224	Canola	cytosol, nucleus, plasma membrane	15.53	16.56
CDY67233	Canola	cytosol, nucleus, plasma membrane	15.22	16.53
CDY31394	Canola	cytosol, nucleus, plasma membrane	15.22	16.53
CDX89223	Canola	cytosol, nucleus, plasma membrane	15.22	16.42
Bra026304.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.22	16.36
AT4G27860.3	Thale cress	nucleus	15.37	15.94
CDY14269	Canola	cytosol	12.73	14.21
CDY19021	Canola	cytosol, nucleus, plasma membrane	10.4	13.99
Bra010393.1-P	Field mustard	nucleus	13.2	12.04
Solyc03g096800.2.1	Tomato	nucleus	20.34	11.27

Protein Annotations

EnsemblPlants:TraesCS7D01G027600.1	EnsemblPlantsGene:TraesCS7D01G027600	PANTHER:PTHR31851	PANTHER:PTHR31851:SF16	SEG:seg	TIGR:cd01059
TMHMM:TMhelix	MapMan:24.2.12.2	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:13505170..13511505

Molecular Weight (calculated)

70314.5 Da

IEP (calculated)

5.151

GRAVY (calculated)

-0.355

Length

644 amino acids

Sequence
(BLAST)

001: MMEVAVESPQ PAAWDHFKEK VEIMEEENGG ASAAAAAAAA AAGELLTREI KKRLLNHAHE NGNGHGHVNG GGPEELKVVS EEEDKVEEAP EEPKVAEEEQ
101: KSHLQQTILF DAAKGLWKCR HCDWTYRLTS PCENGTIDHR GYPHQIEQNL ESLVEKMDRF TVHRTKPPQA EEEKEEEAPE EQQLRHKSIF FDAAKGLWKC
201: RHCDWTYRLS SPCGNGTVDH RGLLKPEHLA VESYSEDQAA EDPVMMPLQS EMQNSNDTTT KIESRTYAHH SHGTVVKPVH SITESSLEDQ NTTTTTTTTT
301: SATATTSSTT TSAEVTTHSS SSTGIFDAEV IEWMTDDMPP LKPADGVIMD ATHHLHGHED VHGTTTTTFE NGSFTTHVSH TTELKVDCPN VTTIARGDLP
401: TSPIPQAEDR PYVAVSVPED VNPAAPSPQQ SDDWDIPKAI VYGGLVESVT SLSVVSAAAS SGAKTLDIFI LGIANLMGGL PLIFHNIADL RDIRDVNEDN
501: ERVGHYWLQL GRRSKARLHM ILALLSYIVF GLLPPILYGL SFRESNDREN KMMAVAGASL VCIALLALGK AHVKAAPRTY FKTLMYYLTV AVSSSGLSCV
601: VGVLITRLLV HFEIIEQGGS AAPPSPGLSF PHSVGAQTSA WASF

Best Arabidopsis Sequence Match ( AT4G27860.2 )
(BLAST)

001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV

Arabidopsis Description

vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.