Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026303.1-P | Field mustard | cytosol, nucleus, plasma membrane | 94.6 | 94.44 |
| CDY67233 | Canola | cytosol, nucleus, plasma membrane | 90.89 | 90.89 |
| CDY31394 | Canola | cytosol, nucleus, plasma membrane | 90.89 | 90.89 |
| CDX89223 | Canola | cytosol, nucleus, plasma membrane | 89.88 | 89.28 |
| AT4G27860.3 | Thale cress | nucleus | 51.94 | 49.6 |
| CDX92847 | Canola | plastid | 16.36 | 35.66 |
| CDY31395 | Canola | plasma membrane | 11.64 | 35.2 |
| TraesCS7B01G200500.1 | Wheat | extracellular | 6.58 | 34.21 |
| GSMUA_Achr6P36880_001 | Banana | cytosol, nucleus, plasma membrane | 15.68 | 33.33 |
| TraesCS6B01G375800.1 | Wheat | extracellular | 5.9 | 30.97 |
| VIT_00s0245g00030.t01 | Wine grape | plasma membrane | 10.29 | 30.65 |
| PGSC0003DMT400001535 | Potato | cytosol, peroxisome, plasma membrane | 16.02 | 28.53 |
| TraesCS7A01G031500.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.5 | 28.01 |
| GSMUA_Achr1P20170_001 | Banana | nucleus | 20.24 | 26.73 |
| VIT_00s0267g00030.t01 | Wine grape | cytosol | 17.88 | 26.5 |
| VIT_00s0245g00010.t01 | Wine grape | cytosol | 16.02 | 26.03 |
| TraesCS4A01G141900.1 | Wheat | extracellular | 4.89 | 24.37 |
| CDX97398 | Canola | mitochondrion, plasma membrane, plastid | 19.22 | 24.31 |
| CDX80427 | Canola | cytosol, nucleus, plasma membrane | 18.38 | 22.43 |
| CDY14269 | Canola | cytosol | 21.08 | 21.66 |
| KRH66122 | Soybean | cytosol | 16.36 | 21.46 |
| CDX89224 | Canola | cytosol, nucleus, plasma membrane | 21.25 | 20.86 |
| Solyc09g059460.2.1 | Tomato | cytosol | 17.54 | 20.68 |
| CDY29865 | Canola | cytosol, nucleus, plasma membrane | 21.42 | 20.35 |
| CDX88089 | Canola | cytosol, nucleus, plasma membrane | 18.38 | 20.3 |
| CDX92846 | Canola | cytosol, nucleus, plasma membrane | 20.57 | 19.87 |
| CDX89222 | Canola | nucleus | 25.63 | 19.24 |
| PGSC0003DMT400071835 | Potato | cytosol, nucleus, plasma membrane | 18.21 | 18.59 |
| CDY19019 | Canola | nucleus | 24.62 | 18.55 |
| Os06t0103800-01 | Rice | plasma membrane | 21.25 | 16.76 |
| CDY19021 | Canola | cytosol, nucleus, plasma membrane | 13.15 | 16.28 |
| KRH72565 | Soybean | cytosol, nucleus | 14.67 | 15.68 |
| OQU75676 | Sorghum | plasma membrane | 19.56 | 15.63 |
| TraesCS7D01G027600.1 | Wheat | cytosol, nucleus, plasma membrane | 16.69 | 15.37 |
| Zm00001d035875_P002 | Maize | nucleus | 21.59 | 15.33 |
| TraesCS4A01G458000.1 | Wheat | cytosol, nucleus, plasma membrane | 16.86 | 15.17 |
| TraesCS4A01G457600.2 | Wheat | nucleus | 19.9 | 15.11 |
| TraesCS7A01G031200.1 | Wheat | cytosol, nucleus, plasma membrane | 16.36 | 14.99 |
| TraesCS4A01G457700.2 | Wheat | nucleus | 20.4 | 14.14 |
| TraesCS7A01G031400.2 | Wheat | nucleus | 20.57 | 13.88 |
| TraesCS7D01G027900.2 | Wheat | nucleus | 20.24 | 13.78 |
| KRH16940 | Soybean | cytosol, nucleus, plasma membrane | 19.06 | 13.76 |
| TraesCS7D01G028000.1 | Wheat | nucleus | 19.9 | 13.52 |
| HORVU7Hr1G003870.3 | Barley | nucleus | 19.39 | 12.98 |
| Solyc03g096800.2.1 | Tomato | nucleus | 21.92 | 11.19 |
| HORVU7Hr1G003880.2 | Barley | nucleus | 4.72 | 6.68 |
Protein Annotations
| EnsemblPlants:CDY19020 | EnsemblPlantsGene:GSBRNA2T00006269001 | GO:A0A078FXC5 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF16 | ProteinID:CDY19020 | ProteinID:CDY19020.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEC611 | UniProt:A0A078FXC5 | MapMan:24.2.12.2 | : | : | : |
Description
BnaC01g20480DBnaC01g20480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXC5]
Coordinates
chrLK032091:-:399363..402805
Molecular Weight (calculated)
66097.8 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.491
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTATNQTP SPSSTVDDDN GDGVYTDEFT KLPPDSPHSS EDEDSVDFSH EQDSSLVPIG FELHEAIDTG SASRSVRGKD SQTERDFLDS DVEIVIKNQH
101: EYYFYCPCCG EDITKTVKLV KKSDIQPAKK SDNANKPIDT KNGSRSEDKK TKNLSWLPAY LQKLFLSVYG HIKDKDSGKI EVDSKSTNND LGTNSEEPSI
201: DVKTEKDRPS FPKWYLDVFA WLFLCIIIAL SFLFTSPQQS SPFITPPHLE LPSIPPLPLP SLSILWLLPA FPVLLLVTMA MRSGYIPIYH KEKGDKEVDS
301: KSTDTTSEEQ IKKTKIEDDQ AADSCQDSDK KTDKQKVHPV LVDPPPPQEQ PSMQIANKET PPKTQAEPGV QPDTQPEIPK SVEPGKGGNK LEILKSIVYG
401: GLTQSITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLI VHSLQELINE KPKTRTNTDD QKESDADVEE EDRYVEALGR REKWWFHRLI AISSFVVCGL
501: IPPLVYGFSF RRRVEKRQEY KTLAVYAASL LCIVLLSVAK AYVSKRREYV KTLFRYTSMA TTASGFSTFM GYFVNQWLEK SGFYDESTET PRV
101: EYYFYCPCCG EDITKTVKLV KKSDIQPAKK SDNANKPIDT KNGSRSEDKK TKNLSWLPAY LQKLFLSVYG HIKDKDSGKI EVDSKSTNND LGTNSEEPSI
201: DVKTEKDRPS FPKWYLDVFA WLFLCIIIAL SFLFTSPQQS SPFITPPHLE LPSIPPLPLP SLSILWLLPA FPVLLLVTMA MRSGYIPIYH KEKGDKEVDS
301: KSTDTTSEEQ IKKTKIEDDQ AADSCQDSDK KTDKQKVHPV LVDPPPPQEQ PSMQIANKET PPKTQAEPGV QPDTQPEIPK SVEPGKGGNK LEILKSIVYG
401: GLTQSITSLC TVTSAAASGA STLNVLALGV ANLSSGLLLI VHSLQELINE KPKTRTNTDD QKESDADVEE EDRYVEALGR REKWWFHRLI AISSFVVCGL
501: IPPLVYGFSF RRRVEKRQEY KTLAVYAASL LCIVLLSVAK AYVSKRREYV KTLFRYTSMA TTASGFSTFM GYFVNQWLEK SGFYDESTET PRV
001: MDPTMNPTPT PSSAGNSVCT DELTNLPPED SPLDSEKDDS VDFSQEQGSE SNEAIDTENG SRSVDKNQYS ETEVVVRAKD LQTEPDSLDD DVEIVIKNQH
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV
101: KYYIYCPCCG EDITKTVKLV KISDPKHTKD HDKAVDSDTE NGSKSKDKNT KVPSWFSDFI QPLFSSEDRG KKGVVDSELL GTYEDLGIIG EEPSIDVSNE
201: KDRPSFPKWY LDVFAWLFLC IIIALSVLST SPPPFIQPHL QLPSMPTLRM PSASVLLLLP TSAVLLLFII SMRSRFTPRY HKEKGEVVPK STDSKSHDDQ
301: AANTDQDFDK KTEKPSKQTV NKETQNHDKE AADPDQDVDK ETENQKSHLT PIYPSPLEQP SKQIINKETQ TEPMLPPNAQ SEIPNSVEPR KGGNKVEILK
401: SIVYGGLTES ITSLCTVTSA AASGASTLNV LALGVANLSS GLLLTVHSLQ ELINEKPRKQ TNTDDSPEEG EGEEDRYEEV LGRREYSRIH RVIAISSFVI
501: FGLIPPLVYG FSFRKKMEKR QEYKVLAVYA VSLLCIVLLS IAKAYVSKKR DYVKTLFRYT TTATTASGFS QFVGYLVSQW LEKSGFYDDS PETQRV
Arabidopsis Description
vacuolar iron transporter (VIT) family protein [Source:TAIR;Acc:AT4G27860]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.