CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES02290
EES19830
OQU75676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75880.1	EES02290	AT3G16310.1	21798944
AT1G75880.1	EES19830	AT3G16310.1	21798944
AT1G75880.1	OQU75676	AT5G24290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34395	Sorghum	plastid	82.55	80.87
Zm00001d018791_P001	Maize	plastid	81.25	80.21
EER88779	Sorghum	extracellular, golgi, mitochondrion, plastid	71.88	72.44
VIT_18s0001g14810.t01	Wine grape	cytosol	42.19	46.82
Solyc04g081790.2.1	Tomato	extracellular, plasma membrane	42.45	46.57
PGSC0003DMT400070969	Potato	extracellular	25.52	45.79
VIT_18s0001g14790.t01	Wine grape	endoplasmic reticulum, golgi	42.45	45.4
KRH28831	Soybean	plasma membrane	42.71	44.81
KRH17462	Soybean	extracellular, plasma membrane, plastid	42.71	44.69
Solyc04g081770.2.1	Tomato	cytosol	39.58	44.57
KRH55991	Soybean	extracellular	41.93	44.48
CDY51993	Canola	plasma membrane	36.72	44.2
KRH55993	Soybean	extracellular	41.67	44.2
CDY41727	Canola	extracellular	37.5	44.17
EER99270	Sorghum	extracellular, plasma membrane	41.41	44.17
CDX87653	Canola	cytosol	35.16	44.12
CDY42062	Canola	cytosol	33.07	44.1
CDY64565	Canola	extracellular	36.72	44.06
KRH17461	Soybean	nucleus	42.19	44.02
VIT_18s0001g14800.t01	Wine grape	extracellular, golgi	41.67	43.96
KRH05977	Soybean	nucleus	42.45	43.82
KRH17463	Soybean	endoplasmic reticulum, golgi	41.41	43.8
Bra015804.1-P	Field mustard	cytosol	34.9	43.79
KRH17460	Soybean	nucleus	41.15	43.65
CDY36116	Canola	extracellular, plasma membrane	36.2	43.57
CDY41728	Canola	extracellular	36.98	43.56
CDY53577	Canola	extracellular	36.98	43.56
VIT_18s0001g14780.t01	Wine grape	plasma membrane	38.02	43.45
CDY09420	Canola	extracellular	36.2	43.44
VIT_18s0001g14760.t01	Wine grape	extracellular	31.51	43.37
KRH61019	Soybean	extracellular, plasma membrane	40.1	43.14
KRH51682	Soybean	extracellular, golgi	40.89	43.13
PGSC0003DMT400025569	Potato	extracellular	39.58	43.06
KRH55990	Soybean	extracellular, plasma membrane, vacuole	40.89	43.01
KRH05980	Soybean	endoplasmic reticulum, golgi	40.62	42.98
KRH05978	Soybean	plastid	42.19	42.97
Solyc12g089350.1.1	Tomato	extracellular, golgi	38.54	42.9
KRH51681	Soybean	extracellular, plasma membrane	39.84	42.86
KRH61020	Soybean	endoplasmic reticulum, golgi, plastid	40.62	42.86
CDX85929	Canola	endoplasmic reticulum, plasma membrane	40.36	42.82
Bra010987.1-P	Field mustard	plasma membrane	38.8	42.82
Bra015803.1-P	Field mustard	cytosol	38.54	42.77
KRH05976	Soybean	nucleus	41.41	42.74
Bra027951.1-P	Field mustard	extracellular	38.8	42.69
KRH51683	Soybean	plasma membrane	31.77	42.66
CDY48852	Canola	extracellular	36.2	42.64
AT1G75900.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	40.36	42.58
Bra003736.1-P	Field mustard	extracellular, plasma membrane	40.1	42.54
Bra015802.1-P	Field mustard	extracellular	40.1	42.54
CDX87651	Canola	extracellular	40.1	42.54
AT3G43570.1	Thale cress	extracellular	35.42	42.5
CDX87652	Canola	golgi, plasma membrane	40.1	42.42
CDY65553	Canola	extracellular	36.46	42.42
Bra026636.1-P	Field mustard	extracellular	38.54	42.41
CDY53576	Canola	extracellular	36.98	42.39
CDX68113	Canola	endoplasmic reticulum, plasma membrane	39.84	42.27
CDX73211	Canola	extracellular	39.84	42.27
Solyc06g048670.2.1	Tomato	extracellular	38.8	42.21
KRH69753	Soybean	extracellular, plasma membrane, vacuole	40.1	42.19
AT1G58525.1	Thale cress	extracellular	37.5	42.11
PGSC0003DMT400075642	Potato	extracellular	39.32	41.94
AT1G75880.1	Thale cress	golgi, plasma membrane	40.89	41.87
AT1G58725.1	Thale cress	extracellular	38.02	41.83
AT1G59030.1	Thale cress	extracellular, plasma membrane	38.02	41.83
AT1G59406.1	Thale cress	extracellular	38.02	41.83
Bra027858.1-P	Field mustard	extracellular	38.02	41.83
KRH08025	Soybean	extracellular, vacuole	39.84	41.8
Solyc04g081780.2.1	Tomato	extracellular	37.24	41.69
AT3G43550.1	Thale cress	extracellular	31.25	41.67
Bra027859.1-P	Field mustard	extracellular	37.76	41.55
CDY53562	Canola	extracellular	26.82	41.53
KRH69760	Soybean	extracellular	39.06	41.44
Bra027950.1-P	Field mustard	extracellular	37.76	41.43
Solyc04g081800.1.1	Tomato	extracellular, plasma membrane	38.54	41.34
CDX73210	Canola	golgi, mitochondrion, plasma membrane	39.58	41.19
PGSC0003DMT400025568	Potato	extracellular	37.5	41.14
AT3G14820.1	Thale cress	extracellular, plasma membrane	37.5	41.03
CDY20086	Canola	extracellular, plasma membrane	37.24	40.97
CDY70534	Canola	plasma membrane	39.84	40.91
CDY32339	Canola	extracellular, plasma membrane	37.24	40.74
CDX85928	Canola	plasma membrane	39.58	40.64
Solyc04g081760.2.1	Tomato	extracellular	27.86	40.38
EER90469	Sorghum	extracellular, vacuole	39.58	40.21
Bra003737.1-P	Field mustard	cytosol, plastid	33.59	40.06
AT5G42170.1	Thale cress	extracellular	38.28	39.84
KRH08023	Soybean	extracellular	29.43	38.7
EES03823	Sorghum	plasma membrane	34.38	37.82
AT1G75890.3	Thale cress	plastid	38.54	37.47
KXG38464	Sorghum	cytosol	41.41	37.32
Bra035295.1-P	Field mustard	mitochondrion	27.86	37.15
CDY02386	Canola	golgi	37.76	36.99
OQU76903	Sorghum	plastid	33.85	35.81
AT1G20120.1	Thale cress	plasma membrane	36.98	35.32
EER96404	Sorghum	extracellular, vacuole	33.33	35.26
CDY44206	Canola	plasma membrane	34.9	35.08
AT1G20132.1	Thale cress	extracellular, vacuole	34.38	34.46
CDY69331	Canola	cytosol	22.66	33.72
EER94394	Sorghum	extracellular	31.25	33.61
Bra016475.1-P	Field mustard	plastid	33.07	33.51
EER90082	Sorghum	golgi	31.77	33.15
Bra012211.1-P	Field mustard	endoplasmic reticulum, plasma membrane	35.94	32.94
CDY57591	Canola	endoplasmic reticulum, plasma membrane	35.94	32.94
EES16382	Sorghum	extracellular, golgi	30.73	32.33
OQU84537	Sorghum	endoplasmic reticulum, extracellular	29.95	32.3
CDY71031	Canola	cytosol	8.07	31.0
OQU78161	Sorghum	extracellular	29.69	29.38
EES04670	Sorghum	extracellular	28.65	29.18
KXG26546	Sorghum	mitochondrion, plastid	33.85	28.95
OQU84135	Sorghum	plasma membrane	39.06	28.74
CDY54336	Canola	extracellular, golgi, plasma membrane	22.4	28.1
CDY71376	Canola	plastid	34.9	27.35
AT1G20130.1	Thale cress	mitochondrion	37.24	26.78
CDY12974	Canola	golgi, mitochondrion	37.24	26.43
EER87686	Sorghum	extracellular	30.47	26.35
VIT_18s0001g14770.t01	Wine grape	plastid	41.41	25.32
CDY44205	Canola	plasma membrane	33.07	23.01
PGSC0003DMT400025571	Potato	cytosol, plasma membrane, plastid	38.8	21.16
KXG38704	Sorghum	endoplasmic reticulum, plasma membrane	35.42	18.09
Bra012212.1-P	Field mustard	plastid	33.33	16.18
CDY29371	Canola	plasma membrane	35.68	15.75
CDY67439	Canola	plasma membrane	36.2	15.5
Bra025794.1-P	Field mustard	plasma membrane	35.68	15.39

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EntrezGene:8086402	UniProt:C5X9H5	EnsemblPlants:EER97970	ProteinID:EER97970
ProteinID:EER97970.2	InterPro:GDSL	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0016787
GO:GO:0016788	GO:GO:0019538	InterPro:IPR006311	InterPro:IPR036514	PFAM:PF00657	PFscan:PS51318
PANTHER:PTHR22835	PANTHER:PTHR22835:SF242	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	EnsemblPlantsGene:SORBI_3002G033000	SUPFAM:SSF52266
InterPro:TAT_signal	TMHMM:TMhelix	UniParc:UPI0003C6C10F	RefSeq:XP_002461449.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:3017252..3022970

Molecular Weight (calculated)

41672.4 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.117

Length

384 amino acids

Sequence
(BLAST)

001: MASSSQSQSQ SQSLTPYLRG NAHHAPWRSR FVRRALLVAA AAAALAAAAG GSGTADDQIP AIFMFGDSIV DPGNNNNRLT EARANFPPYG QDFPGGVATG
101: RFSNGLVPGD LLASKLGIKE LLPPFLSSDL ELKDLLTGVA FACGGSGYDP LTSKLATTLS SDDQLELFHE YKQKLTALVG EKEMTRVISE GVFFTVMGSN
201: DIVNNYFTLP IRRHEYDLPS YVDFLVSSAI NFTKTLNDMG AKKIGFLGVP PLGCCPSQIT LGGSPSRQCE PQRNQASELY NSRVSKEIER LNAERSASGS
301: KIVYFDIYYN LLDLIQNPSS YGFKDASEGC CGSTVLNAAI FIAYHSACPN AIDYIFWDGF HPTEKAYNIV VDKLIQQASK YLMM

Best Arabidopsis Sequence Match ( AT1G75880.2 )
(BLAST)

001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAGGI PLPQQLIYFE EYIEKLKQMV GEKRTKFIIK NSLFVVICGS NDIANDFFTL
201: PPVRLHYTVA SFTALMADNA RSFAQTLYGY GARRILVFGA PPIGCVPSQR TVAGGPTRDC VARFNDAAKL FNTKLSANID VLSRTLQDPT IIYIDIYSPL
301: LDLILNPHQY GFKVANKGCC GTGLIEVTAL CNNYTASVCP IRSDYVFWDS FHPTEKAYRI IVAKLLDRYL NRFF

Arabidopsis Description

EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.